Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   DV167_RS04820 Genome accession   NZ_CP031329
Coordinates   832594..833205 (-) Length   203 a.a.
NCBI ID   WP_002251250.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M22425     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 827594..838205
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV167_RS04790 - 827775..828200 (+) 426 Protein_784 AzlC family ABC transporter permease -
  DV167_RS04805 pilL 830558..831055 (-) 498 WP_002251253.1 PilX family type IV pilin Machinery gene
  DV167_RS04810 pilK 831060..831656 (-) 597 WP_002251252.1 pilus assembly protein Machinery gene
  DV167_RS04815 pilJ 831635..832597 (-) 963 WP_002251251.1 PilW family protein Machinery gene
  DV167_RS04820 pilV 832594..833205 (-) 612 WP_002251250.1 type IV pilus modification protein PilV Regulator
  DV167_RS04825 pilH 833235..833900 (-) 666 WP_002251249.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DV167_RS04830 dnaB 834209..835615 (-) 1407 WP_002213843.1 replicative DNA helicase -
  DV167_RS04840 - 835778..836365 (+) 588 WP_002242525.1 superoxide dismutase -

Sequence

Protein


Download         Length: 203 a.a.        Molecular weight: 21942.88 Da        Isoelectric Point: 4.6510

>NTDB_id=264394 DV167_RS04820 WP_002251250.1 832594..833205(-) (pilV) [Neisseria meningitidis strain M22425]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNQTLSAVDGDFAIDAIKTKAQLAEEQLKRFSYELKNALPDAAAIHYAVCKDSLGAAPTLSAGSTFSQNCDGSAN
GDTLIKVLWVNDSAGDSDIARTNLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 612 bp        

>NTDB_id=264394 DV167_RS04820 WP_002251250.1 832594..833205(-) (pilV) [Neisseria meningitidis strain M22425]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAACCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTCGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCTGTTCAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCAGAGACGCAAACCA
TCGTCAGTCAAATCACGCAAAACCTGATGGAAGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCAGACACTATCAGCTGTGGATGGCGATTTTGCGATTGATGCCATAAAAACTAAGGCGCA
GTTGGCAGAGGAACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCATCCATTACGCCG
TCTGCAAGGATTCGTTGGGTGCTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTCAAAATTGCGATGGTAGTGCAAAT
GGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCGCCCGTACGAATCTTGAGACGAA
CGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

90.338

100

0.921
  pilV/pilI Neisseria gonorrhoeae MS11

81.773

100

0.818