Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilV   Type   Regulator
Locus tag   DV155_RS01570 Genome accession   NZ_CP031326
Coordinates   281686..282309 (-) Length   207 a.a.
NCBI ID   WP_115431813.1    Uniprot ID   -
Organism   Neisseria meningitidis strain M21374     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 276686..287309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  DV155_RS01530 dut 276921..277373 (-) 453 WP_002220679.1 dUTP diphosphatase -
  DV155_RS01535 - 277516..277941 (+) 426 Protein_260 AzlC family ABC transporter permease -
  DV155_RS01555 pilX 279692..280165 (-) 474 WP_205254963.1 PilX family type IV pilin Machinery gene
  DV155_RS01560 pilK 280170..280763 (-) 594 WP_115431786.1 pilus assembly protein Machinery gene
  DV155_RS01565 pilJ 280742..281689 (-) 948 WP_041423518.1 PilW family protein Machinery gene
  DV155_RS01570 pilV 281686..282309 (-) 624 WP_115431813.1 type IV pilus modification protein PilV Regulator
  DV155_RS01575 pilH 282342..283007 (-) 666 WP_101118812.1 Tfp pilus assembly protein FimT/FimU Machinery gene
  DV155_RS01580 dnaB 283309..284715 (-) 1407 WP_002213843.1 replicative DNA helicase -
  DV155_RS01590 - 284878..285465 (+) 588 WP_002242525.1 superoxide dismutase -
  DV155_RS01600 - 286691..287200 (-) 510 WP_002213852.1 isoprenylcysteine carboxyl methyltransferase family protein -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 22434.38 Da        Isoelectric Point: 4.9700

>NTDB_id=264237 DV155_RS01570 WP_115431813.1 281686..282309(-) (pilV) [Neisseria meningitidis strain M21374]
MKNNDCFRLKNPQSGMALIEVLVAMLVLTIGILALLSVQLRTVASVREAETQTIVSQITQNLMEGMLMNPTIDSDSNKKN
YNLYMGNHTLPHTLSAVDGDFQVDAIKTKTQLAEAQLKRFSYELKNALPDAAAIHYAVCKDSSGVAPTLSAGSTFSSNCD
ASANGDTLIKVLWVNDSAGDSDINRTDLETNGNNIVYTYQARVGGRE

Nucleotide


Download         Length: 624 bp        

>NTDB_id=264237 DV155_RS01570 WP_115431813.1 281686..282309(-) (pilV) [Neisseria meningitidis strain M21374]
ATGAAGAATAATGATTGCTTCCGCCTGAAAAATCCCCAGTCCGGTATGGCGCTGATAGAAGTCTTGGTTGCTATGCTCGT
TCTGACCATCGGTATTTTGGCACTATTGTCCGTACAGTTGCGGACAGTCGCTTCCGTCAGGGAGGCGGAGACGCAAACCA
TCGTCAGCCAAATCACGCAAAACCTGATGGAGGGAATGTTGATGAATCCGACCATTGATTCGGACAGCAACAAGAAAAAC
TATAATCTTTACATGGGAAACCATACACTACCGCATACACTATCAGCTGTGGATGGCGATTTTCAGGTTGATGCCATAAA
AACTAAGACGCAGTTGGCAGAGGCACAATTGAAGAGATTTAGTTATGAGCTGAAAAATGCCTTGCCGGATGCGGCAGCCA
TCCATTACGCCGTCTGCAAGGATTCGTCGGGTGTTGCGCCGACATTGTCCGCCGGCAGTACTTTTTCTTCAAATTGCGAT
GCTAGTGCAAATGGGGATACTTTGATTAAAGTATTGTGGGTAAATGATTCGGCAGGGGATTCGGATATCAACCGTACGGA
TCTTGAGACGAACGGCAACAATATCGTATATACCTATCAGGCAAGGGTCGGAGGTCGGGAATGA

Domains

Predicted by InterProScan.

Prokaryotic N-terminal methylation motif (N_methyl)

(11-36)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilV Neisseria meningitidis 8013

92.754

100

0.928
  pilV/pilI Neisseria gonorrhoeae MS11

82.126

100

0.821