Detailed information NTG0263624

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: DV114_RS08975
• Genome accession: NZ_CP031251
• Coordinates: 1875420..1877447 (-)
• Length: 675 a.a.
• NCBI ID: WP_101756426.1
• Uniprot ID: A0A9X7I549
• Organism: Neisseria subflava strain M18660
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1870420..1882447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV114_RS08955	tssB	1871486..1871986 (+)	501	WP_049332195.1	type VI secretion system contractile sheath small subunit	-
DV114_RS08960	tssC	1872025..1873560 (+)	1536	WP_101756363.1	type VI secretion system contractile sheath large subunit	-
DV114_RS08965	-	1873613..1873876 (-)	264	WP_049332348.1	PAAR domain-containing protein	-
DV114_RS08970	-	1873925..1875070 (-)	1146	WP_107697373.1	hypothetical protein	-
DV114_RS08975	uvrB	1875420..1877447 (-)	2028	WP_101756426.1	excinuclease ABC subunit UvrB	Machinery gene
DV114_RS08980	comP	1877663..1878157 (-)	495	WP_199903543.1	type IV pilin protein	Machinery gene
DV114_RS08985	comE	1878340..1878627 (-)	288	WP_004520163.1	helix-hairpin-helix domain-containing protein	Machinery gene

Sequence

Protein

• Length: 675 a.a.
• Molecular weight: 76896.48 Da
• Isoelectric Point: 5.0044

>NTDB_id=263624 DV114_RS08975 WP_101756426.1 1875420..1877447(-) (uvrB) [Neisseria subflava strain M18660]
MEVIQYPNSPFKLHQPFPPAGDQPTAIAGLLEGLSDGLAYQTLLGVTGSGKTYTMANVIAQSGRPAIIMAHNKTLAAQLY
AEMREFFPENAVEYFVSYYDYYQPEAYVPSRDLFIEKDSAINEHIEQMRLSATKNLMTRDDVIIVATVSAIYGIGDPTEY
QQMVLSVKEGDTIEQRDIIATLVSMQYERGDLDFKRGSFRVRGDVIDVYPAESSENALRISLFDDEIDRLDMFDPLSGSL
IQRVGRYTVFPSSHYVTPRDTVLRACESIKEELRERIEFFAREQRPVEQQRIEQRTRFDLEMLYEMGFCKGIENYSRHFS
GKKEGEPPPTLMDYLPDNAIMFIDESHVTVTQIGGMYKGDASRKQNLVDYGFRLPSARDNRPLKFHEFEKVMPQTVFVSA
TPAKYEEEHAGQVVEQVVRPTGLVDPKIIIRPVATQVDDLMSEINDRIQKGERVLVTTLTKRMAEQLTDYYSELGIKVRY
LHSDIDTVERVEIIRDLRLGLFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSHRSLIQTIGRAARNVNGVAILYAD
KITDSMKAAIDETERRREKQIKFNEEHGIVPQQIKKQVKDIIDGVYHEEDSGKGRLKGKNKVKVGEIHNEEDALKEIAKL
EKAMQQAARDLQFEEAAVLRDKIRNIKENLLFGSE

Nucleotide

• Length: 2028 bp

>NTDB_id=263624 DV114_RS08975 WP_101756426.1 1875420..1877447(-) (uvrB) [Neisseria subflava strain M18660]
ATGGAAGTCATCCAATATCCCAATTCTCCGTTTAAACTTCATCAGCCATTTCCTCCTGCCGGTGACCAGCCCACTGCCAT
TGCTGGCTTGCTCGAAGGACTTTCAGACGGACTTGCTTATCAAACCCTGCTCGGCGTAACCGGTTCGGGCAAAACCTACA
CCATGGCGAACGTCATCGCCCAAAGCGGCCGTCCCGCCATCATCATGGCGCACAACAAAACCCTTGCTGCCCAGCTTTAT
GCCGAAATGCGCGAGTTTTTCCCTGAAAACGCGGTGGAATATTTCGTCTCCTACTACGACTATTACCAGCCCGAAGCCTA
TGTGCCCAGCCGCGATTTGTTCATCGAAAAAGACAGTGCGATCAACGAACACATCGAGCAGATGCGCCTTTCCGCCACCA
AAAACCTGATGACGCGCGATGACGTGATTATCGTTGCCACCGTGTCCGCCATTTACGGTATCGGCGACCCGACCGAATAT
CAACAAATGGTGTTGTCCGTCAAAGAAGGCGACACCATCGAGCAGCGCGACATCATCGCTACGCTCGTTTCCATGCAATA
CGAACGCGGCGATTTGGACTTCAAACGCGGCAGCTTCCGCGTACGCGGCGACGTGATCGACGTGTACCCCGCCGAAAGCT
CCGAAAACGCCTTGCGCATCAGCTTGTTCGACGACGAAATCGACCGTCTCGATATGTTCGACCCGCTTTCAGGCAGCCTT
ATCCAGCGCGTCGGCCGCTACACCGTCTTCCCGTCCAGCCACTACGTTACCCCACGCGACACCGTCTTGCGCGCCTGCGA
ATCCATCAAAGAAGAACTGCGCGAACGCATTGAATTCTTCGCCCGCGAACAACGCCCCGTCGAACAACAACGCATCGAAC
AGCGCACCCGCTTCGACCTCGAAATGCTCTACGAAATGGGTTTCTGCAAAGGCATCGAAAACTACTCCCGCCACTTCTCC
GGAAAAAAAGAAGGTGAACCGCCGCCCACGCTGATGGACTATCTGCCCGACAACGCCATCATGTTCATTGACGAAAGCCA
CGTTACCGTTACCCAAATCGGAGGCATGTACAAAGGCGACGCATCGCGCAAGCAAAACCTCGTGGACTACGGCTTCCGCC
TGCCTTCCGCCCGCGACAACCGACCGCTCAAATTCCACGAATTTGAAAAAGTCATGCCGCAAACCGTCTTCGTTTCCGCC
ACTCCCGCCAAATACGAAGAAGAACACGCCGGACAAGTGGTCGAACAAGTCGTCCGCCCCACAGGGCTGGTCGACCCCAA
AATCATCATCCGCCCCGTCGCCACCCAAGTTGACGACTTAATGAGCGAAATCAACGACCGCATCCAAAAAGGCGAACGCG
TACTCGTTACCACCCTCACCAAACGCATGGCGGAGCAACTCACCGACTATTACAGCGAACTCGGCATCAAAGTGCGCTAC
CTGCACAGCGACATCGACACCGTAGAGCGCGTTGAAATTATTAGAGATTTGCGGCTCGGACTATTTGACGTACTCGTCGG
CATCAACCTCTTGCGCGAAGGCTTGGACATCCCCGAAGTCTCCCTCGTCGCCATTCTCGACGCCGACAAAGAAGGCTTCC
TGCGCTCGCACCGCAGCCTGATTCAAACCATAGGCCGCGCCGCGCGCAACGTGAACGGCGTCGCCATCCTGTACGCCGAT
AAAATTACCGACTCCATGAAAGCCGCCATCGACGAAACCGAACGCCGCCGCGAAAAACAGATTAAATTTAACGAAGAACA
CGGCATCGTTCCGCAGCAGATTAAAAAACAGGTTAAAGACATCATCGACGGCGTGTACCACGAAGAAGACAGCGGCAAAG
GTCGTCTGAAAGGTAAAAACAAGGTTAAAGTCGGCGAAATCCACAATGAAGAAGATGCCTTGAAAGAAATTGCCAAACTG
GAAAAAGCCATGCAGCAGGCAGCTAGGGATTTGCAGTTTGAAGAAGCAGCTGTGTTACGCGATAAAATTAGGAATATTAA
AGAGAACTTATTGTTTGGATCGGAATAA

Domains

Predicted by InterProScan.

• Ultra-violet resistance protein B (UvrB) (557-598)

• Helicase conserved C-terminal domain (Helicase_C) (444-549)

• UvrB interaction domain (UvrB_inter) (165-255)

• UvrB/uvrC motif (UVR) (635-668)

• Type III restriction enzyme, res subunit (ResIII) (23-144)

3D structure

• AlphaFold DB: A0A9X7I549

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	55.354	98.222	0.544
uvrB	Streptococcus pneumoniae R6	55.354	98.222	0.544
uvrB	Streptococcus pneumoniae D39	55.354	98.222	0.544