Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C0119_RS04135 Genome accession   NZ_CP025618
Coordinates   837294..837677 (+) Length   127 a.a.
NCBI ID   WP_004814763.1    Uniprot ID   -
Organism   Acinetobacter schindleri strain SGAir0122     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 832294..842677
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0119_RS04125 (C0119_03285) - 835142..836275 (-) 1134 WP_048882365.1 efflux RND transporter periplasmic adaptor subunit -
  C0119_RS04130 (C0119_03280) - 836327..836986 (-) 660 WP_048882366.1 hypothetical protein -
  C0119_RS04135 (C0119_03275) pilG 837294..837677 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  C0119_RS04140 (C0119_03270) - 837708..838076 (+) 369 WP_004814764.1 response regulator -
  C0119_RS04145 (C0119_03265) - 838082..838618 (+) 537 WP_108675428.1 chemotaxis protein CheW -
  C0119_RS04150 (C0119_03260) - 838664..840736 (+) 2073 WP_108675427.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14201.30 Da        Isoelectric Point: 4.7172

>NTDB_id=263050 C0119_RS04135 WP_004814763.1 837294..837677(+) (pilG) [Acinetobacter schindleri strain SGAir0122]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=263050 C0119_RS04135 WP_004814763.1 837294..837677(+) (pilG) [Acinetobacter schindleri strain SGAir0122]
ATGGACGATAAATTCCAAAATCTAAAAGTGATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCAGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTGATTACCGCAGTAGACGGTTTTGAAGCATTGTCAAAAATTGCAGAAGCAAATCCCGACA
TCGTTTTTGTAGATATCATGATGCCTCGCCTTGATGGTTATCAGACTTGTGCCTTAATTAAAAACTCGCAAAGTTATCAG
AACATTCCTGTTATTATGCTATCGAGTAAAGATGGTTTGTTCGATCAGGCCAAAGGCCGTGTGGTAGGTTCAGATGAATA
TCTCACTAAGCCATTTAGCAAAGATGAGTTGCTTACTGCAATCCGCAACCATATCAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment