Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | C0119_RS01330 | Genome accession | NZ_CP025618 |
| Coordinates | 281956..283374 (-) | Length | 472 a.a. |
| NCBI ID | WP_004810143.1 | Uniprot ID | N9N911 |
| Organism | Acinetobacter schindleri strain SGAir0122 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 276956..288374
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C0119_RS01315 (C0119_06100) | lptG | 277991..279061 (+) | 1071 | WP_004810149.1 | LPS export ABC transporter permease LptG | - |
| C0119_RS01320 (C0119_06095) | gpmI | 279186..280736 (+) | 1551 | WP_108675611.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| C0119_RS01325 (C0119_06090) | - | 280757..281929 (+) | 1173 | WP_004810144.1 | S41 family peptidase | - |
| C0119_RS01330 (C0119_06085) | pilR | 281956..283374 (-) | 1419 | WP_004810143.1 | sigma-54-dependent transcriptional regulator | Regulator |
| C0119_RS01335 (C0119_06080) | pilS | 283399..284964 (-) | 1566 | WP_004810141.1 | two-component system sensor histidine kinase NtrB | Regulator |
| C0119_RS01340 (C0119_06075) | - | 285014..285649 (-) | 636 | WP_004810139.1 | response regulator | - |
| C0119_RS01345 (C0119_06070) | - | 285873..286928 (+) | 1056 | WP_026056747.1 | serine hydrolase | - |
| C0119_RS01350 (C0119_06065) | thrC | 286993..288132 (-) | 1140 | WP_004810136.1 | threonine synthase | - |
Sequence
Protein
Download Length: 472 a.a. Molecular weight: 53538.51 Da Isoelectric Point: 6.0929
>NTDB_id=263036 C0119_RS01330 WP_004810143.1 281956..283374(-) (pilR) [Acinetobacter schindleri strain SGAir0122]
MEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKKRLADHQYDACLTDLNLPDGNGLQLLEFISEHHPSLPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYQSNQQDTLEYKMLIGQSKPIQQLRTTLHKIARSQ
APVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPAELMESELFGHKKGSFTGAMQDKQGLIQSAHGGSLFLDEI
AELPLSMQVKLLRAVQEKRIRPLGSDIEIDVDFRVISASHQDLEAQVQQGKFRQDLFFRIHVMDLVLPPLRERGNDILLL
AEHFIQKICQEWQIPVKRLTEHSKEQLLTQYYPGNVRELRNIIERAITLSDEDTIDIQHLQTAPLRQSFVTSEITSNIAS
ESSNTTDTFIVPKKLPEEGLELYMEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDEEE
MEQQPLVLLVDDEEDLCTLMQMSLMRMGIRTHIAHRLEDAKKRLADHQYDACLTDLNLPDGNGLQLLEFISEHHPSLPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINQKHLEQLLQKALNKPVDYQSNQQDTLEYKMLIGQSKPIQQLRTTLHKIARSQ
APVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPAELMESELFGHKKGSFTGAMQDKQGLIQSAHGGSLFLDEI
AELPLSMQVKLLRAVQEKRIRPLGSDIEIDVDFRVISASHQDLEAQVQQGKFRQDLFFRIHVMDLVLPPLRERGNDILLL
AEHFIQKICQEWQIPVKRLTEHSKEQLLTQYYPGNVRELRNIIERAITLSDEDTIDIQHLQTAPLRQSFVTSEITSNIAS
ESSNTTDTFIVPKKLPEEGLELYMEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDEEE
Nucleotide
Download Length: 1419 bp
>NTDB_id=263036 C0119_RS01330 WP_004810143.1 281956..283374(-) (pilR) [Acinetobacter schindleri strain SGAir0122]
GTGGAACAACAACCACTGGTACTATTGGTCGATGATGAAGAAGATCTCTGTACGCTCATGCAGATGTCGCTCATGCGTAT
GGGAATTCGCACGCATATCGCCCATCGTCTGGAGGATGCTAAAAAACGCCTGGCAGATCATCAGTATGATGCCTGCCTTA
CGGACTTGAATCTGCCTGATGGTAATGGCTTGCAGCTACTGGAATTTATCAGTGAGCATCATCCTTCCCTACCGGTTGCT
GTGTTAACTGCCTATGGCAATATGGATATTGCCATTGCTGCACTCAAGGCAGGTGCCTTTGACTTTGTCAGTAAGCCGAT
CAATCAGAAACATCTGGAGCAGTTACTGCAAAAGGCACTAAATAAGCCAGTAGATTACCAATCCAATCAGCAAGATACCC
TAGAATATAAAATGCTGATTGGCCAGTCCAAGCCGATTCAGCAATTACGTACGACTTTGCATAAAATTGCCCGCTCTCAA
GCCCCGGTATTTATTACCGGTGAATCTGGTACAGGTAAAGAAGTTGTAGCAAATCTGGTTCATCGCCTCAGTAACCGGAG
TGAAGGACCCTTTATTGCCATTAACTGTGGCGCAATTCCAGCTGAACTGATGGAAAGTGAGCTGTTCGGGCACAAGAAAG
GCAGCTTTACTGGCGCCATGCAGGACAAACAGGGCCTGATCCAGTCTGCACATGGCGGCAGTTTATTTCTGGATGAAATT
GCAGAACTTCCACTCAGTATGCAGGTCAAACTGCTACGTGCAGTACAGGAAAAACGGATTCGCCCTTTAGGTTCAGATAT
TGAAATTGATGTGGATTTTCGCGTCATCAGCGCCAGTCATCAGGACCTGGAAGCACAGGTACAGCAAGGTAAATTTCGTC
AGGATTTATTCTTCCGCATTCATGTGATGGATCTAGTGTTGCCACCATTACGTGAGCGTGGTAATGACATTCTGCTGCTG
GCTGAACACTTTATTCAGAAGATCTGTCAGGAATGGCAAATCCCTGTGAAACGCCTGACTGAACATAGCAAAGAGCAGTT
ACTGACTCAATACTATCCAGGAAATGTCCGGGAATTGCGTAATATCATCGAGCGAGCTATTACCCTCAGCGATGAAGACA
CAATTGATATCCAGCATTTGCAAACTGCACCTTTACGCCAGAGTTTTGTGACCTCCGAAATCACATCGAATATAGCATCC
GAATCGAGTAACACTACTGACACTTTTATTGTACCGAAAAAACTGCCTGAAGAAGGTCTTGAACTGTATATGGAGAAAAT
CGAGAAAGAAATTTTGCTAAATGCATTGAATCTGACTCACTGGAACCGTACGCTTGCCGCAAAAAAGTTGGGCATGTCTT
TCCGCTCGCTGCGTTATCGTCTAAAGAAATTTGGGCTCGATACCGATGAAGAAGAATGA
GTGGAACAACAACCACTGGTACTATTGGTCGATGATGAAGAAGATCTCTGTACGCTCATGCAGATGTCGCTCATGCGTAT
GGGAATTCGCACGCATATCGCCCATCGTCTGGAGGATGCTAAAAAACGCCTGGCAGATCATCAGTATGATGCCTGCCTTA
CGGACTTGAATCTGCCTGATGGTAATGGCTTGCAGCTACTGGAATTTATCAGTGAGCATCATCCTTCCCTACCGGTTGCT
GTGTTAACTGCCTATGGCAATATGGATATTGCCATTGCTGCACTCAAGGCAGGTGCCTTTGACTTTGTCAGTAAGCCGAT
CAATCAGAAACATCTGGAGCAGTTACTGCAAAAGGCACTAAATAAGCCAGTAGATTACCAATCCAATCAGCAAGATACCC
TAGAATATAAAATGCTGATTGGCCAGTCCAAGCCGATTCAGCAATTACGTACGACTTTGCATAAAATTGCCCGCTCTCAA
GCCCCGGTATTTATTACCGGTGAATCTGGTACAGGTAAAGAAGTTGTAGCAAATCTGGTTCATCGCCTCAGTAACCGGAG
TGAAGGACCCTTTATTGCCATTAACTGTGGCGCAATTCCAGCTGAACTGATGGAAAGTGAGCTGTTCGGGCACAAGAAAG
GCAGCTTTACTGGCGCCATGCAGGACAAACAGGGCCTGATCCAGTCTGCACATGGCGGCAGTTTATTTCTGGATGAAATT
GCAGAACTTCCACTCAGTATGCAGGTCAAACTGCTACGTGCAGTACAGGAAAAACGGATTCGCCCTTTAGGTTCAGATAT
TGAAATTGATGTGGATTTTCGCGTCATCAGCGCCAGTCATCAGGACCTGGAAGCACAGGTACAGCAAGGTAAATTTCGTC
AGGATTTATTCTTCCGCATTCATGTGATGGATCTAGTGTTGCCACCATTACGTGAGCGTGGTAATGACATTCTGCTGCTG
GCTGAACACTTTATTCAGAAGATCTGTCAGGAATGGCAAATCCCTGTGAAACGCCTGACTGAACATAGCAAAGAGCAGTT
ACTGACTCAATACTATCCAGGAAATGTCCGGGAATTGCGTAATATCATCGAGCGAGCTATTACCCTCAGCGATGAAGACA
CAATTGATATCCAGCATTTGCAAACTGCACCTTTACGCCAGAGTTTTGTGACCTCCGAAATCACATCGAATATAGCATCC
GAATCGAGTAACACTACTGACACTTTTATTGTACCGAAAAAACTGCCTGAAGAAGGTCTTGAACTGTATATGGAGAAAAT
CGAGAAAGAAATTTTGCTAAATGCATTGAATCTGACTCACTGGAACCGTACGCTTGCCGCAAAAAAGTTGGGCATGTCTT
TCCGCTCGCTGCGTTATCGTCTAAAGAAATTTGGGCTCGATACCGATGAAGAAGAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
74.895 |
100 |
0.752 |
| pilR | Pseudomonas aeruginosa PAK |
48.188 |
99.364 |
0.479 |