Detailed information NTG0262913

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: DV390_RS00540
• Genome accession: NZ_CP031242
• Coordinates: 124382..126421 (-)
• Length: 679 a.a.
• NCBI ID: WP_042594251.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M21460
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 119382..131421

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV390_RS00530	-	119930..122200 (+)	2271	WP_038441061.1	NADP-dependent malic enzyme	-
DV390_RS00535	-	122425..124351 (+)	1927	Protein_103	LTA synthase family protein	-
DV390_RS00540	uvrB	124382..126421 (-)	2040	WP_042594251.1	excinuclease ABC subunit UvrB	Machinery gene
DV390_RS00550	zevB	127036..128004 (-)	969	WP_005666730.1	zinc transporter permease subunit ZevB	-
DV390_RS00555	zevA	128007..128627 (-)	621	WP_042594250.1	zinc transporter binding subunit ZevA	-
DV390_RS00560	-	128952..129257 (+)	306	WP_005650215.1	type II toxin-antitoxin system RelE/ParE family toxin	-
DV390_RS00565	-	129268..129591 (+)	324	WP_005650217.1	HigA family addiction module antitoxin	-

Sequence

Protein

• Length: 679 a.a.
• Molecular weight: 77615.05 Da
• Isoelectric Point: 5.0409

>NTDB_id=262913 DV390_RS00540 WP_042594251.1 124382..126421(-) (uvrB) [Haemophilus influenzae strain M21460]
MSEKINTKPFILHSDFRPSGDQPQAIEKLAENLTDGLAHQTLLGVTGSGKTFTIANVIAQLNRPAMLLAPNKTLAAQLYA
EMKTFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYL
QMMLHLQQGAIIDQRQILAKLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSF
GAVPRFTIYPKTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIEMMNELGYCSGIENYSRYLSG
RNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSAT
PGPYELEKSGSEIIDQVVRPTGLLDPLIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYAD
NITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGELLDIGQGANQKAKANKQRGKMSAEPTALYNAPKNAKEYQQ
QIKKLEQQMYKFAQDLEFEKAAAIRDQLHQLREQFVFDN

Nucleotide

• Length: 2040 bp

>NTDB_id=262913 DV390_RS00540 WP_042594251.1 124382..126421(-) (uvrB) [Haemophilus influenzae strain M21460]
ATGTCTGAAAAAATCAACACAAAACCATTCATTCTGCATTCCGACTTTCGTCCCTCTGGCGATCAGCCACAAGCTATCGA
AAAATTGGCTGAAAATTTAACGGATGGTTTGGCGCATCAAACTTTACTCGGGGTAACAGGCTCGGGGAAAACCTTTACTA
TCGCCAATGTAATCGCTCAATTAAATCGCCCCGCGATGTTACTTGCACCGAATAAAACCCTTGCTGCTCAGCTTTATGCA
GAAATGAAAACTTTTTTTCCAGAAAATGCGGTGGAATATTTTGTGTCTTACTATGATTATTATCAGCCAGAAGCCTATGT
GCCGAGCAGTGATACATTTATTGAAAAAGATGCGTCTATTAATGATCAAATTGAACAAATGCGACTTTCTGCGACGAAAT
CTTTTCTAGAACGTCGAGATACCATCGTGGTAGCTTCTGTTTCTGCAATTTATGGTTTGGGCGATCCTGATAGCTATTTA
CAAATGATGTTGCATTTACAACAAGGTGCCATTATCGATCAACGCCAAATTTTAGCGAAGTTAGCGGAATTGCAATATAC
CCGAAATGATCAAGCATTTCAGCGTGGAACTTTCCGTGTTCGCGGAGAAATTATTGATATTTTCCCTGCGGAATCTGATG
ATCGTGCGGTGCGTATTGAATTATTTGATGATGAAATCGAGCGTTTAAGTTTATTTGATCCGCTCACTGGTAGTAGTTTT
GGTGCTGTACCACGTTTTACGATCTATCCTAAAACTCACTATGTGACGCCAAGAGAACGTATTTTAGATGCGATAGAAAA
CATCAAAAAAGAACTGGTATCACGCCGTGAATACTTCATTAAAGAACATAAACTTTTAGAAGAACAGCGTATCAGCCAAC
GAACCCAATTTGATATTGAAATGATGAATGAATTGGGCTATTGCTCGGGAATTGAAAACTACTCTCGCTATTTATCGGGC
AGAAATGAGGGCGAACCACCACCAACATTATTTGATTATATGCCCTCTGATGCGATTTTAATTATTGATGAATCTCATGT
AACTGTGCCTCAAATTGGTGGGATGTATCGTGGTGACCGTTCACGTAAAGAAACCTTAGTCGAATATGGTTTCCGTTTGC
CGTCCGCATTGGATAATCGTCCGTTACGCTTTGAGGAATTTGAACGCTTAGCTCCGCAAACCATTTATGTTTCCGCAACA
CCAGGGCCTTATGAATTAGAAAAATCAGGCAGTGAAATCATCGATCAAGTGGTTCGCCCCACTGGTTTGCTTGATCCGCT
TATTGAAATTCGTCCAGTGTCAATTCAAGTGGATGATTTACTTTCCGAAGCTCGCCAAAGAGCGGATAAAAATGAGCGAG
TTTTAGTCACAACACTCACTAAAAAAATGGCGGAAGATTTAACGGATTATTTAGATGAACACGGGATTCGTGTGCGTTAT
CTACATTCTGATATTGATACCGTGGAACGCGTCGAAATTATCCGTGATTTGCGTTTAGGCGAATTTGATGTATTAGTGGG
AATTAACTTATTGCGTGAAGGTTTAGATATTCCAGAAGTGTCTCTTGTGGCGATTTTAGATGCAGACAAAGAAGGATTTT
TACGTTCCGAACGTTCTTTAATTCAAACCATCGGTCGTGCTGCACGAAACTTAAATGGTAAAGCGATTTTATATGCGGAT
AACATCACAAAATCCATGGAAAAAGCCATCACCGAAACCAATCGTCGTCGTGAAAAACAAACAAAATACAATGAAGAACA
CGGCATTGTGCCACAAGCATTAAATAAGAAAGTCGGCGAATTGTTAGATATTGGGCAAGGTGCAAACCAAAAAGCGAAAG
CCAATAAACAACGTGGAAAAATGTCGGCAGAACCAACCGCACTTTATAATGCACCGAAAAATGCCAAAGAATATCAACAA
CAAATCAAAAAACTGGAACAACAAATGTATAAATTTGCGCAAGATTTGGAATTTGAAAAAGCCGCGGCAATTCGCGATCA
ATTACATCAATTGCGTGAACAATTTGTTTTTGATAACTAA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (446-549)

• Ultra-violet resistance protein B (UvrB) (557-598)

• Type III restriction enzyme, res subunit (ResIII) (20-102)

• UvrB/uvrC motif (UVR) (640-674)

• UvrB interaction domain (UvrB_inter) (164-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	57.44	98.969	0.568
uvrB	Streptococcus pneumoniae R6	57.44	98.969	0.568
uvrB	Streptococcus pneumoniae D39	57.44	98.969	0.568