Detailed information NTG0262698

Bioinformatically predicted

Overview

• Name: uvrB
• Type: Machinery gene
• Locus tag: DV400_RS05410
• Genome accession: NZ_CP031236
• Coordinates: 1108607..1110646 (+)
• Length: 679 a.a.
• NCBI ID: WP_005628806.1
• Uniprot ID: -
• Organism: Haemophilus influenzae strain M25267
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1103607..1115646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DV400_RS05380	-	1104498..1104761 (-)	264	WP_061671384.1	type II toxin-antitoxin system YafQ family toxin	-
DV400_RS05385	-	1104758..1105033 (-)	276	WP_050948473.1	type II toxin-antitoxin system RelB/DinJ family antitoxin	-
DV400_RS05390	zevA	1105385..1106005 (+)	621	WP_050846950.1	zinc transporter binding subunit ZevA	-
DV400_RS05395	zevB	1106008..1106982 (+)	975	WP_050948474.1	zinc transporter permease subunit ZevB	-
DV400_RS09715	-	1107158..1107352 (-)	195	WP_050948475.1	hypothetical protein	-
DV400_RS09720	-	1107578..1107799 (-)	222	WP_050948476.1	ESPR domain-containing protein	-
DV400_RS05410	uvrB	1108607..1110646 (+)	2040	WP_005628806.1	excinuclease ABC subunit UvrB	Machinery gene
DV400_RS05415	-	1110677..1112602 (-)	1926	WP_050948781.1	LTA synthase family protein	-
DV400_RS05420	-	1112837..1115107 (-)	2271	WP_050948477.1	NADP-dependent malic enzyme	-

Sequence

Protein

• Length: 679 a.a.
• Molecular weight: 77556.03 Da
• Isoelectric Point: 5.0426

>NTDB_id=262698 DV400_RS05410 WP_005628806.1 1108607..1110646(+) (uvrB) [Haemophilus influenzae strain M25267]
MSEKINTKPFILHSDFRPSGDQPQAIEKLAENLTDGLAHQTLLGVTGSGKTFTIANVIAQLNRPAMLLAPNKTLAAQLYA
EMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYL
QMMLHLQQGAIIDQRQILAKLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRAVRIELFDDEIERLSLFDPLTGSSF
GAVPRFTIYPKTHYVTPRERILDAIENIKKELVSRREYFIKEHKLLEEQRISQRTQFDIEMMNELGYCSGIENYSRYLSG
RNEGEPPPTLFDYMPSDAILIIDESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSAT
PGPYELEKSGSEIIDQVVRPTGLLDPLIEIRPVSIQVDDLLSEARQRADKNERVLVTTLTKKMAEDLTDYLDEHGIRVRY
LHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYAD
SITKSMEKAITETNRRREKQTKYNEEHGIVPQALNKKVGELLDIGQGANQKAKANKQRGKMAAEPTALYNAPKNAKEYQQ
QIKKLEQQMYKFAQDLEFEKAAAIRDQLHQLREQFVFEN

Nucleotide

• Length: 2040 bp

>NTDB_id=262698 DV400_RS05410 WP_005628806.1 1108607..1110646(+) (uvrB) [Haemophilus influenzae strain M25267]
ATGTCTGAAAAAATCAACACAAAACCATTCATTCTTCATTCCGACTTTCGCCCCTCTGGCGATCAGCCACAAGCTATCGA
AAAATTGGCTGAAAATTTAACGGATGGATTGGCACATCAAACTTTGCTCGGAGTAACAGGCTCGGGGAAGACGTTTACTA
TCGCCAACGTAATCGCTCAATTAAATCGCCCCGCAATGTTACTTGCACCGAATAAAACCCTTGCCGCTCAACTTTATGCA
GAAATGAAAGCCTTTTTTCCAGAAAATGCGGTGGAATATTTTGTGTCTTACTATGATTATTATCAGCCAGAAGCCTATGT
GCCTAGCAGTGATACTTTCATTGAAAAAGATGCTTCTATTAATGATCAAATCGAACAAATGCGACTTTCTGCGACAAAAT
CTTTTTTAGAACGTCGAGATACCATCGTAGTGGCTTCCGTTTCTGCAATTTATGGTTTGGGCGATCCTGATAGCTACTTA
CAAATGATGTTGCATTTACAACAAGGTGCCATTATAGATCAACGCCAAATTTTAGCGAAGTTAGCGGAATTGCAATATAC
CCGCAATGATCAAGCATTTCAGCGTGGAACTTTCCGTGTTCGTGGGGAAATTATTGATATTTTCCCTGCAGAATCCGATG
ATCGTGCGGTGCGTATTGAATTATTTGATGATGAAATTGAACGATTAAGTTTATTTGATCCGCTCACTGGCAGTAGTTTT
GGTGCTGTTCCACGTTTTACGATCTATCCTAAAACGCACTATGTTACGCCAAGAGAACGCATTTTAGATGCGATAGAAAA
CATCAAAAAAGAACTCGTATCACGCCGTGAATACTTCATTAAAGAACATAAACTTTTAGAAGAACAACGAATTAGCCAAC
GAACCCAATTTGATATTGAAATGATGAATGAATTGGGCTATTGCTCGGGTATTGAAAACTACTCTCGCTATTTGTCAGGC
AGAAATGAAGGCGAGCCACCCCCAACATTATTTGATTATATGCCCTCTGATGCCATTTTAATTATTGATGAATCTCATGT
GACCGTGCCTCAAATTGGTGGAATGTATCGTGGTGACCGTTCGCGCAAAGAAACCTTGGTTGAATATGGTTTCCGTTTAC
CGTCCGCATTGGATAATCGTCCGTTACGCTTTGAGGAATTTGAACGCTTAGCCCCACAAACCATCTATGTTTCCGCAACA
CCAGGGCCCTATGAATTAGAAAAATCAGGCAGTGAAATCATCGATCAAGTGGTTCGCCCGACTGGTTTACTTGATCCGCT
TATTGAAATTCGTCCAGTCTCAATTCAAGTGGATGATTTACTTTCGGAAGCTCGCCAAAGAGCGGATAAAAATGAGCGCG
TTTTAGTGACAACACTCACTAAAAAAATGGCGGAAGATTTAACGGATTATTTAGATGAACATGGGATCCGAGTACGTTAT
CTACATTCTGATATTGATACGGTGGAACGTGTGGAAATTATCCGTGATTTGCGTTTAGGAGAATTCGATGTGTTAGTCGG
CATCAACTTGCTACGTGAGGGATTGGATATTCCAGAAGTGTCTCTTGTGGCGATTTTAGATGCGGACAAAGAAGGATTTT
TACGCTCCGAACGCTCTTTAATCCAAACCATCGGCCGTGCTGCACGAAACTTAAATGGTAAAGCGATTTTATATGCGGAT
AGCATCACAAAATCGATGGAAAAAGCTATTACGGAAACTAATCGTCGTCGTGAAAAACAAACAAAATATAATGAAGAACA
TGGCATTGTGCCACAAGCATTGAATAAGAAAGTTGGGGAATTGTTAGATATTGGGCAAGGTGCAAACCAAAAAGCGAAAG
CCAATAAACAACGTGGAAAAATGGCGGCAGAACCAACCGCACTTTATAATGCACCGAAAAATGCCAAAGAATATCAACAA
CAAATCAAAAAATTGGAACAACAAATGTATAAATTTGCACAAGATTTGGAATTTGAAAAAGCCGCGGCAATTCGCGATCA
ATTACATCAATTGCGTGAACAGTTTGTTTTTGAAAACTAA

Domains

Predicted by InterProScan.

• Type III restriction enzyme, res subunit (ResIII) (20-102)

• Helicase conserved C-terminal domain (Helicase_C) (446-549)

• UvrB interaction domain (UvrB_inter) (164-254)

• Ultra-violet resistance protein B (UvrB) (557-598)

• UvrB/uvrC motif (UVR) (640-674)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrB	Streptococcus pneumoniae TIGR4	57.44	98.969	0.568
uvrB	Streptococcus pneumoniae R6	57.44	98.969	0.568
uvrB	Streptococcus pneumoniae D39	57.44	98.969	0.568