Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   C0J00_RS07275 Genome accession   NZ_CP025536
Coordinates   1438782..1439591 (-) Length   269 a.a.
NCBI ID   WP_104968253.1    Uniprot ID   A0A2L0D5S0
Organism   Streptococcus pluranimalium strain TH11417     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1433782..1444591
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS07265 (C0J00_07270) smc 1434300..1437845 (-) 3546 WP_104968251.1 chromosome segregation protein SMC -
  C0J00_RS07270 (C0J00_07275) rnc 1437847..1438548 (-) 702 WP_104968252.1 ribonuclease III -
  C0J00_RS07275 (C0J00_07280) vicX 1438782..1439591 (-) 810 WP_104968253.1 MBL fold metallo-hydrolase Regulator
  C0J00_RS07280 (C0J00_07285) vicK 1439593..1440939 (-) 1347 WP_104968254.1 cell wall metabolism sensor histidine kinase VicK Regulator
  C0J00_RS07285 (C0J00_07290) vicR 1440932..1441639 (-) 708 WP_104968255.1 response regulator YycF Regulator
  C0J00_RS07290 (C0J00_07295) - 1441878..1442663 (+) 786 WP_104968256.1 amino acid ABC transporter ATP-binding protein -
  C0J00_RS07295 (C0J00_07300) - 1442674..1443501 (+) 828 WP_104968257.1 transporter substrate-binding domain-containing protein -
  C0J00_RS07300 (C0J00_07305) - 1443520..1444215 (+) 696 WP_104968258.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30151.29 Da        Isoelectric Point: 5.9900

>NTDB_id=262358 C0J00_RS07275 WP_104968253.1 1438782..1439591(-) (vicX) [Streptococcus pluranimalium strain TH11417]
MADKGFKYSILASGSTGNAFYLETPKKRLLIDAGLTGKKITSLLAEIDRRPEDLDAILITHEHSDHIKGVGVLARKYNLD
LYANEKTWEVMDAKNMLGKIDNSQKHIFSREKMMTFGDIDIESFGVSHDAVDPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVANADGYLIESNHDIEILRAGSYPWKTKQRILSDFGHLSNEAGAQAMIDTLGNRTKKIYLGHLSKENNIKELAHMTMES
NLMQADLGVNHDFKVLDTSPDTATPLVDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=262358 C0J00_RS07275 WP_104968253.1 1438782..1439591(-) (vicX) [Streptococcus pluranimalium strain TH11417]
GTGGCTGATAAAGGATTTAAATACAGTATTTTAGCTTCAGGGTCGACAGGTAATGCTTTTTATCTGGAGACACCAAAGAA
ACGTCTTTTGATTGATGCTGGATTGACTGGTAAGAAAATTACCAGTCTTTTAGCTGAAATTGATCGACGACCTGAGGATT
TAGATGCTATTTTGATTACACACGAGCATTCAGACCATATCAAAGGAGTTGGGGTTTTGGCTCGCAAGTACAATCTTGAC
TTGTATGCGAATGAAAAAACCTGGGAAGTTATGGATGCCAAAAATATGCTAGGTAAGATAGATAATTCACAGAAGCATAT
CTTTTCGCGCGAAAAAATGATGACTTTCGGAGATATTGATATTGAGTCTTTTGGCGTTAGTCATGATGCGGTAGATCCGC
AGTTTTATCGTTTTATGAAAGATGATAAAAGCTTTGTCATGTTAACTGACACGGGCTATGTTAGCGATCGTATGGCAGGG
ATTGTTGCCAATGCGGATGGTTATTTGATTGAATCTAACCATGATATTGAAATTCTCAGAGCGGGTTCCTATCCATGGAA
GACCAAACAAAGGATTCTTTCTGACTTTGGACATTTGTCCAATGAGGCTGGTGCTCAGGCTATGATTGACACGCTTGGTA
ATCGTACTAAGAAGATTTATCTTGGACATTTGAGTAAGGAGAACAATATCAAGGAGCTAGCTCATATGACCATGGAGTCA
AATCTGATGCAAGCTGACTTGGGTGTTAATCATGATTTCAAAGTATTGGATACCTCACCAGACACGGCGACGCCATTAGT
CGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-215)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L0D5S0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.093

100

0.751

Multiple sequence alignment