Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   C0J00_RS02730 Genome accession   NZ_CP025536
Coordinates   527859..528860 (+) Length   333 a.a.
NCBI ID   WP_104967453.1    Uniprot ID   -
Organism   Streptococcus pluranimalium strain TH11417     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 522859..533860
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C0J00_RS02705 (C0J00_02705) - 523130..523522 (-) 393 WP_104967448.1 VOC family protein -
  C0J00_RS02710 (C0J00_02710) - 523625..524293 (-) 669 WP_104967449.1 NAD(P)H-dependent oxidoreductase -
  C0J00_RS02715 (C0J00_02715) - 524420..525955 (+) 1536 WP_104967450.1 ClC family H(+)/Cl(-) exchange transporter -
  C0J00_RS02720 (C0J00_02720) - 525970..526530 (+) 561 WP_104967451.1 TIGR00730 family Rossman fold protein -
  C0J00_RS02725 (C0J00_02725) - 526578..527663 (-) 1086 WP_104967452.1 M24 family metallopeptidase -
  C0J00_RS02730 (C0J00_02730) ccpA 527859..528860 (+) 1002 WP_104967453.1 catabolite control protein A Regulator
  C0J00_RS02735 (C0J00_02735) - 528952..530406 (+) 1455 WP_104967454.1 alpha-amylase -
  C0J00_RS02740 (C0J00_02740) - 530479..531477 (+) 999 WP_104967455.1 glycosyltransferase -
  C0J00_RS02745 (C0J00_02745) - 531479..532822 (+) 1344 WP_104967456.1 glycosyltransferase family 4 protein -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36729.70 Da        Isoelectric Point: 4.9488

>NTDB_id=262344 C0J00_RS02730 WP_104967453.1 527859..528860(+) (ccpA) [Streptococcus pluranimalium strain TH11417]
MNTDDTITIYDVAREAGVSMATVSRVVNGNKNVKENTRQKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNISNAYFA
LLAKGIDDIAEMYKYNIVLASSDENDDKEVNVVNTLFAKQVDGIIFMGHRLTDKIRAEFSRSRTPVVLAGTIDLEHQLPS
VNIDYEKAVEGVVSDLAKNHQKIAFVSGPLLDDINGKVRLAGYKDALNANGIDYTEGLVFEAKYRYEDGYELAERVINSG
ATAAYVGEDELAVGLLNGLFAAGKRVPEDFEIMTSNDSEIVKYTRPNLSSINQPIYDLGAVAMRMLTKIMNKEELEEKEI
ILNHGVTKRASTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=262344 C0J00_RS02730 WP_104967453.1 527859..528860(+) (ccpA) [Streptococcus pluranimalium strain TH11417]
ATGAATACAGATGATACGATTACGATTTACGATGTTGCCAGAGAAGCTGGTGTATCGATGGCGACAGTTAGTCGAGTTGT
CAATGGAAACAAAAATGTTAAAGAAAATACTCGGCAGAAAGTACTAGAGGTTATTGACCGTTTAGACTACCGTCCAAATG
CCGTAGCCCGTGGTCTTGCTAGCAAAAAGACAACAACAGTTGGGGTTGTTATTCCAAATATTTCAAATGCTTACTTTGCC
CTCTTAGCCAAAGGGATTGATGATATCGCTGAAATGTACAAATATAACATTGTGCTGGCATCAAGTGATGAGAACGACGA
TAAGGAAGTCAATGTTGTTAATACGCTTTTTGCCAAGCAGGTTGATGGCATTATCTTTATGGGACATCGCCTAACGGATA
AAATTCGTGCGGAGTTCTCACGTTCAAGGACACCAGTAGTTCTTGCAGGTACCATTGACTTAGAACATCAATTACCAAGT
GTTAATATTGATTATGAAAAGGCTGTTGAAGGAGTGGTATCTGACCTAGCTAAAAATCACCAAAAAATCGCCTTTGTCTC
AGGACCACTTCTTGATGACATCAATGGTAAAGTTCGTCTAGCAGGCTATAAGGATGCCCTTAATGCTAATGGTATTGATT
ACACTGAAGGGCTTGTTTTTGAGGCTAAATACCGTTACGAAGATGGTTATGAATTGGCAGAACGTGTGATTAATTCAGGT
GCTACAGCTGCTTATGTTGGAGAAGATGAACTAGCTGTGGGACTCTTGAATGGACTCTTTGCGGCTGGGAAACGTGTGCC
AGAAGACTTTGAAATTATGACAAGTAATGATTCTGAAATTGTCAAATACACACGTCCTAACTTATCTTCAATCAATCAAC
CAATTTACGATTTGGGTGCCGTTGCTATGCGTATGTTAACTAAAATCATGAACAAAGAAGAATTAGAAGAAAAAGAAATC
ATTCTTAATCATGGTGTGACAAAACGTGCATCAACAAAATAA

Domains

Predicted by InterproScan.

Bacterial regulatory proteins, lacI family (LacI)

(8-53)

Periplasmic binding protein-like domain (Peripla_BP_3)

(177-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

77.477

100

0.775
  ccpA Streptococcus pneumoniae D39

76.276

100

0.763
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

56.495

99.399

0.562

Multiple sequence alignment