Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   BLDA23_RS16880 Genome accession   NZ_CP031126
Coordinates   3207248..3208249 (-) Length   333 a.a.
NCBI ID   WP_003184445.1    Uniprot ID   Q65G28
Organism   Bacillus licheniformis strain 0DA23-1     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3202248..3213249
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BLDA23_RS16855 (BLDA23_16855) - 3203138..3203770 (+) 633 WP_003184432.1 GNAT family N-acetyltransferase -
  BLDA23_RS16860 (BLDA23_16860) - 3203792..3204436 (+) 645 WP_003184434.1 acetoin utilization AcuB family protein -
  BLDA23_RS16865 (BLDA23_16865) - 3204433..3205593 (+) 1161 WP_080626982.1 acetoin utilization protein AcuC -
  BLDA23_RS16870 (BLDA23_16870) motS 3205655..3206344 (-) 690 WP_003184438.1 flagellar motor protein MotS -
  BLDA23_RS16875 (BLDA23_16875) motP 3206334..3207152 (-) 819 WP_011198198.1 flagellar motor protein MotP -
  BLDA23_RS16880 (BLDA23_16880) ccpA 3207248..3208249 (-) 1002 WP_003184445.1 catabolite control protein A Regulator
  BLDA23_RS16885 (BLDA23_16885) - 3208565..3209641 (-) 1077 WP_003184447.1 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase -
  BLDA23_RS16890 (BLDA23_16890) - 3209852..3210301 (-) 450 WP_011198199.1 hypothetical protein -
  BLDA23_RS16895 (BLDA23_16895) ytxJ 3210451..3210777 (-) 327 WP_044821735.1 bacillithiol system redox-active protein YtxJ -
  BLDA23_RS16900 (BLDA23_16900) - 3210798..3211214 (-) 417 WP_003184452.1 YtxH domain-containing protein -
  BLDA23_RS16905 (BLDA23_16905) - 3211218..3211640 (-) 423 WP_003184453.1 DUF948 domain-containing protein -
  BLDA23_RS16910 (BLDA23_16910) murC 3211807..3213105 (-) 1299 WP_003184455.1 UDP-N-acetylmuramate--L-alanine ligase -

Sequence

Protein


Download         Length: 333 a.a.        Molecular weight: 36784.27 Da        Isoelectric Point: 5.1627

>NTDB_id=262212 BLDA23_RS16880 WP_003184445.1 3207248..3208249(-) (ccpA) [Bacillus licheniformis strain 0DA23-1]
MSNVTIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIERLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNMDKELHLLNTMLGKQVDGIVFMSGNVTEEHVEEFKRSPVPIVLAASVEEKGETPSVAI
DYEQAIYDAATMLIEKGHKRLAFVSGPMAEPVNQAKKLQGFKRALGDKGLQFKEEYVVEGDYTYDSGMEALEALMKLDEK
PTAVLSATDEMALGVIHAAQDKGLAVPDDLEVIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEEVEEHIV
QLPHRIELRQSTK

Nucleotide


Download         Length: 1002 bp        

>NTDB_id=262212 BLDA23_RS16880 WP_003184445.1 3207248..3208249(-) (ccpA) [Bacillus licheniformis strain 0DA23-1]
ATGAGTAATGTGACAATATATGATGTAGCACGCGAAGCAAATGTAAGTATGGCAACCGTTTCCCGGGTCGTCAACGGGAA
TCCGAATGTCAAGCCGACGACGAGAAAGAAGGTGCTTGAAGCGATCGAGCGTCTTGGCTATCGTCCAAACGCCGTGGCAA
GAGGGCTGGCAAGCAAAAAGACGACGACTGTCGGCGTGATCATTCCCGATATTTCCAGTATCTTTTATTCAGAGCTGGCG
AGGGGAATCGAAGATATCGCAACGATGTACAAGTACAATATTATTTTGAGCAATTCCGACCAGAATATGGACAAAGAACT
TCATCTTTTGAATACGATGCTAGGAAAGCAAGTTGACGGTATCGTCTTTATGAGCGGAAATGTGACTGAAGAGCATGTGG
AGGAATTTAAGCGATCGCCAGTTCCGATCGTGCTTGCGGCATCTGTTGAAGAAAAAGGGGAAACGCCGTCGGTTGCGATC
GATTATGAACAGGCGATTTATGATGCGGCAACCATGCTGATTGAGAAAGGCCATAAGCGCCTTGCGTTCGTCTCAGGACC
TATGGCTGAACCGGTTAATCAAGCGAAAAAACTGCAAGGCTTTAAAAGAGCGCTTGGGGATAAGGGGCTGCAATTTAAGG
AAGAGTATGTTGTAGAAGGCGATTATACGTACGATTCAGGAATGGAAGCGCTGGAGGCTTTAATGAAGCTGGATGAAAAA
CCGACAGCCGTCCTGTCAGCGACAGACGAAATGGCGCTCGGCGTTATTCACGCAGCACAGGATAAAGGACTGGCTGTTCC
GGATGACCTTGAAGTGATCGGTTTTGACAATACAAGGCTTTCATTAATGGTTCGGCCGCAGCTGTCGACTGTCGTCCAGC
CTACGTATGATATCGGTGCCGTGGCGATGAGGCTTCTGACAAAGCTGATGAACAAAGAGGAAGTCGAAGAGCATATTGTC
CAGCTGCCGCATCGCATTGAACTCAGACAATCAACAAAATGA

Domains

Predicted by InterProScan.

Bacterial regulatory proteins, lacI family (LacI)

(5-50)

Periplasmic binding protein-like domain (Peripla_BP_3)

(172-332)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65G28

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus gordonii str. Challis substr. CH1

53.939

99.099

0.535
  ccpA Streptococcus pneumoniae D39

53.636

99.099

0.532
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

49.699

99.7

0.495