Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   CAB17_RS03715 Genome accession   NZ_CP025491
Coordinates   847739..850474 (-) Length   911 a.a.
NCBI ID   WP_101900044.1    Uniprot ID   -
Organism   Legionella sainthelensi strain LA01-117     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 842739..855474
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CAB17_RS03685 (CAB17_10310) tsaB 842756..843406 (+) 651 WP_101900041.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB -
  CAB17_RS03690 (CAB17_10315) - 843416..843595 (+) 180 WP_027270259.1 Trm112 family protein -
  CAB17_RS03695 (CAB17_10320) - 843760..845160 (-) 1401 WP_027270258.1 APC family permease -
  CAB17_RS03700 (CAB17_10325) - 845325..845648 (-) 324 WP_101900042.1 BolA family protein -
  CAB17_RS03705 (CAB17_10330) pilA2 845735..846166 (-) 432 WP_058513121.1 pilin Machinery gene
  CAB17_RS03710 (CAB17_10335) - 846454..847698 (-) 1245 WP_101900043.1 6-phosphofructokinase -
  CAB17_RS03715 (CAB17_10340) letS 847739..850474 (-) 2736 WP_101900044.1 two-component system sensor histidine kinase LetS Regulator
  CAB17_RS03720 (CAB17_10345) gltX 850603..852018 (+) 1416 WP_101900045.1 glutamate--tRNA ligase -
  CAB17_RS03725 (CAB17_10350) - 852015..853289 (+) 1275 WP_101900046.1 serine hydrolase domain-containing protein -
  CAB17_RS03730 (CAB17_10355) - 853430..854407 (+) 978 WP_101900047.1 hypothetical protein -
  CAB17_RS03735 (CAB17_10360) gstA 854466..855068 (+) 603 WP_101900048.1 glutathione transferase GstA -

Sequence


Protein


Download         Length: 911 a.a.        Molecular weight: 102656.30 Da        Isoelectric Point: 8.1133

>NTDB_id=261984 CAB17_RS03715 WP_101900044.1 847739..850474(-) (letS) [Legionella sainthelensi strain LA01-117]
MLKSIGIKYQLRITTLIPVFLVALLLAIFYNGLFGNDLKQHMSRLGEAYIRQLLPAAQYAMLRGDDRTLQGLINASTINP
EVKALAFYSSDGQLLAYRGGKHSLSKPFTAPKFTGDYIKSKQINPFTINFIAPVTIPKFNLYSNSSFKNILSPMASRADD
ILGWLSIDIDTRSMIIKRYQMLIVTIFITLFGLLVGLTIHYFLSKQIYLPISRLRRSMKQILRNEFETEIKTTSSGELGI
IEQGCSHLQKKHLETIRDLNHHIEVATADLQQSLELLEEKNIELSLEKKKIEEKSRQKSEFIANMSHEIRTPMNGVIGFT
NVLLESKLDPLQLDYVKTIKSSAQDLLGIINDILDFSKIDAGKLHLDCIPLNIRHCIDEVLALAAPNAHKKGIDLIPITE
LNVPKIVLGDPFRVKQFISNLVTNAVKFTDHGYVLIRTKVEQETDRDYTLCITITDTGLGISPEDQNKLFTAFNQADTSI
TRRYGGSGLGLVICKKLCEEMKGRITFASELNKGSVFTAYIKVEKLVAYEVEKNQVHPFAHFKMLCFDDNPMQLEALCNG
LGYWGIKCIAVPSLNQLANKLKNNKDCNIAFLNINKGYEQQITKLIAEHNYFPYVLTSKWLINDYTALGAQGFLYKPISI
QKLQDIIESLTNQENIEKSVNHELEGLREQLRFLHPDLLIAEDNPVNKMLLDSLLGTRANIVAVDNGEMAVSVCNEKKYS
LILLDLHMPKINGLEAARLIRQKSEFNRHTPIVLISANGRDVNDIDLKKSGVNFCLQKPIDEKQLLIQILRIADKAKHSA
IDWQLCVQKASGNQSLAEEFLARFVEELIKNREELIQLMHEKNVKQLGEAAHKLHGACCFSGVPTLQKKVVQVEKLAAHA
ASIAELATPFAELIQSIDAVISEYENQKIKT

Nucleotide


Download         Length: 2736 bp        

>NTDB_id=261984 CAB17_RS03715 WP_101900044.1 847739..850474(-) (letS) [Legionella sainthelensi strain LA01-117]
ATCTTGAAAAGCATTGGTATTAAGTATCAACTAAGAATTACTACTTTAATCCCTGTTTTTCTGGTCGCCCTACTCCTTGC
CATTTTTTATAATGGATTGTTTGGTAATGACTTAAAACAACACATGTCTCGCCTAGGTGAAGCATATATTCGACAATTAC
TACCAGCCGCCCAGTATGCTATGCTGCGTGGGGACGATCGAACCTTACAAGGTCTTATCAATGCATCAACAATTAATCCT
GAAGTCAAAGCACTCGCTTTTTACAGTAGCGATGGCCAACTCCTTGCTTATCGTGGGGGCAAACATTCACTAAGCAAACC
ATTTACTGCACCTAAATTCACTGGGGATTACATTAAAAGTAAACAAATTAATCCCTTTACTATCAACTTTATCGCCCCTG
TCACAATTCCAAAATTTAATTTGTATTCCAACTCTTCTTTTAAAAATATTTTAAGCCCGATGGCATCTCGAGCTGATGAT
ATTCTTGGTTGGTTGTCTATTGATATCGATACTCGCTCAATGATAATCAAACGTTATCAGATGCTTATTGTCACTATTTT
CATTACTTTATTCGGGTTATTAGTAGGATTAACCATTCACTACTTTCTCTCGAAACAAATTTATTTACCTATTTCTCGTT
TGCGAAGGAGCATGAAGCAAATTTTACGAAACGAGTTTGAAACAGAGATAAAAACAACCAGCTCTGGAGAATTAGGAATA
ATTGAACAAGGTTGCTCGCATTTGCAAAAAAAACACCTTGAAACGATACGCGATCTAAACCACCACATTGAAGTAGCAAC
GGCTGATTTACAACAAAGTTTAGAGCTTTTAGAGGAAAAAAATATTGAACTTTCCCTTGAAAAGAAAAAAATAGAAGAAA
AAAGCCGGCAAAAGTCTGAATTTATCGCCAATATGAGTCATGAAATTCGTACTCCGATGAATGGAGTTATTGGTTTTACT
AATGTTTTACTTGAAAGTAAACTTGATCCTTTGCAATTAGATTATGTAAAAACAATTAAGTCATCAGCACAAGACTTATT
GGGGATCATCAATGACATTCTCGATTTCTCAAAAATTGATGCGGGAAAACTTCATCTCGATTGTATTCCATTAAATATTC
GCCACTGTATTGATGAAGTACTCGCTCTCGCAGCACCTAATGCCCATAAAAAAGGAATCGACTTAATTCCTATAACCGAA
CTAAACGTACCTAAGATTGTTTTAGGAGATCCCTTTAGAGTAAAACAGTTTATTAGCAACCTGGTTACTAATGCAGTTAA
ATTTACTGATCATGGATATGTATTAATCCGTACTAAAGTAGAGCAGGAAACAGATAGAGATTACACTTTATGCATTACAA
TTACGGATACAGGCTTAGGTATTTCTCCTGAAGATCAGAACAAGTTGTTTACCGCCTTTAATCAGGCAGATACCAGTATT
ACCCGTCGTTATGGCGGCTCAGGACTTGGTTTGGTAATCTGTAAAAAACTCTGTGAAGAAATGAAAGGCCGTATTACTTT
TGCCAGTGAACTCAACAAAGGTTCTGTTTTTACTGCTTATATCAAGGTTGAAAAATTAGTTGCCTATGAAGTTGAGAAAA
ATCAAGTTCATCCTTTTGCTCATTTTAAAATGCTTTGTTTTGACGATAACCCCATGCAGCTGGAGGCCTTGTGTAATGGA
TTAGGGTATTGGGGAATCAAATGTATCGCTGTACCTTCACTAAATCAACTCGCGAATAAGCTGAAAAATAATAAAGATTG
CAACATCGCTTTTCTTAATATCAATAAAGGTTACGAACAACAAATTACTAAGCTAATAGCCGAGCATAATTATTTTCCTT
ATGTGTTGACCTCTAAATGGCTTATTAATGATTATACAGCACTTGGAGCCCAAGGATTTTTATATAAACCCATTAGTATC
CAAAAACTCCAAGATATTATTGAATCATTAACAAACCAAGAAAATATTGAAAAGTCAGTTAATCATGAATTAGAAGGTTT
AAGAGAACAATTACGTTTCCTACATCCAGATCTTCTTATAGCTGAAGATAATCCAGTGAATAAAATGCTTCTTGACTCTT
TATTAGGTACTCGTGCCAATATTGTAGCGGTTGATAATGGAGAAATGGCTGTATCGGTGTGTAATGAAAAGAAATACAGT
CTTATCTTACTTGACCTGCATATGCCTAAAATAAATGGCTTAGAAGCCGCTCGACTTATCCGTCAAAAATCAGAATTTAA
TCGTCATACACCCATAGTATTAATTAGTGCAAATGGTAGAGATGTAAATGATATTGATTTAAAAAAATCAGGGGTAAATT
TTTGTTTGCAAAAACCCATAGATGAAAAACAATTATTGATCCAAATTTTACGTATTGCAGATAAAGCAAAGCACTCTGCA
ATAGATTGGCAATTGTGTGTTCAAAAAGCCTCTGGAAATCAATCACTAGCCGAGGAGTTCCTTGCTCGATTTGTAGAAGA
ATTGATTAAAAACCGTGAAGAACTCATCCAATTAATGCATGAAAAAAATGTGAAACAATTGGGGGAAGCAGCACATAAAC
TTCATGGAGCATGTTGTTTTAGTGGTGTCCCCACGTTACAAAAAAAGGTAGTTCAAGTAGAAAAACTTGCTGCTCATGCT
GCTTCAATCGCAGAATTAGCTACTCCTTTTGCAGAATTAATTCAAAGCATCGACGCAGTAATTAGTGAATACGAAAATCA
AAAAATAAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

78.39

99.561

0.78


Multiple sequence alignment