Detailed information NTG0261873

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CYK58_RS05870
• Genome accession: NZ_CP025474
• Coordinates: 1213502..1214302 (-)
• Length: 266 a.a.
• NCBI ID: WP_126131363.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain H-137
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1208502..1219302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CYK58_RS05820 (CYK58_05815)	-	1209357..1210142 (-)	786	WP_126131357.1	hypothetical protein	-
CYK58_RS05825 (CYK58_05820)	-	1210142..1210528 (-)	387	Protein_1114	DUF1294 domain-containing protein	-
CYK58_RS05830	-	1210442..1210663 (+)	222	WP_126131358.1	hypothetical protein	-
CYK58_RS05840 (CYK58_05830)	-	1210858..1211250 (-)	393	WP_241234367.1	hypothetical protein	-
CYK58_RS05850 (CYK58_05840)	-	1211541..1212101 (-)	561	WP_126131360.1	hypothetical protein	-
CYK58_RS05855 (CYK58_05845)	-	1212085..1212423 (-)	339	WP_000699911.1	hypothetical protein	-
CYK58_RS05860 (CYK58_05850)	-	1212613..1213044 (-)	432	WP_126131361.1	tetratricopeptide repeat protein	-
CYK58_RS05865 (CYK58_05855)	dprB	1213101..1213505 (-)	405	WP_126131362.1	Holliday junction resolvase RuvX	Machinery gene
CYK58_RS05870 (CYK58_05860)	dprA	1213502..1214302 (-)	801	WP_126131363.1	DNA-processing protein DprA	Machinery gene
CYK58_RS05875 (CYK58_05865)	minE	1214314..1214547 (-)	234	WP_000051412.1	cell division topological specificity factor MinE	-
CYK58_RS05880 (CYK58_05870)	minD	1214544..1215350 (-)	807	WP_015643076.1	septum site-determining protein MinD	-
CYK58_RS05885 (CYK58_05875)	ilvC	1215375..1216367 (-)	993	WP_031247928.1	ketol-acid reductoisomerase	-
CYK58_RS05895 (CYK58_05885)	-	1216616..1217398 (+)	783	WP_126131364.1	NAD+ synthase	-
CYK58_RS05900 (CYK58_05890)	-	1217395..1218333 (+)	939	WP_126131365.1	tetraacyldisaccharide 4'-kinase	-
CYK58_RS05905 (CYK58_05895)	pseH	1218266..1218808 (-)	543	WP_060869628.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29804.80 Da
• Isoelectric Point: 9.3474

>NTDB_id=261873 CYK58_RS05870 WP_126131363.1 1213502..1214302(-) (dprA) [Helicobacter pylori strain H-137]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDIKLLRAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNLINTLLKDHHLKEMPEKKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=261873 CYK58_RS05870 WP_126131363.1 1213502..1214302(-) (dprA) [Helicobacter pylori strain H-137]
ATGAAAAGCAACTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATATAAAGCTTTTGAGAGCACCTTTAAAAGTGGCTATCATCGGCACGAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACAAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTTATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTAATTATCCCCCAAGCGGATTTGAAAAGCGGC
TCTATGAGCAGCGCTAGATTAGCCCAAAAGTATCAAAAACCTTTATTTGTTTTGCCCCAGCGCCTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTGATAAACACCCTTTTAAAAGACC
ACCATTTAAAAGAAATGCCTGAAAAGAAAGACGAATTTTTGGAATATTGCGCCAAAAACCCAAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGACAAGCTTTTAGAATACGAGCTGCTGGGTAAGATTAAACGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	95.865	100	0.959
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41