Detailed information NTG0261281

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CXB49_RS20105
• Genome accession: NZ_CP025429
• Coordinates: 4517491..4518810 (-)
• Length: 439 a.a.
• NCBI ID: WP_101710009.1
• Uniprot ID: A0A2H5E0X2
• Organism: Chromobacterium sp. ATCC 53434
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4512491..4523810

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXB49_RS20090 (CXB49_20090)	-	4512706..4513983 (+)	1278	WP_101710006.1	cupin domain-containing protein	-
CXB49_RS20095 (CXB49_20095)	-	4514015..4515316 (+)	1302	WP_101710007.1	hypothetical protein	-
CXB49_RS23760	-	4515571..4515714 (+)	144	WP_158300966.1	hypothetical protein	-
CXB49_RS20100 (CXB49_20100)	-	4515865..4517142 (+)	1278	WP_101710008.1	hypothetical protein	-
CXB49_RS20105 (CXB49_20105)	pilR	4517491..4518810 (-)	1320	WP_101710009.1	sigma-54 dependent transcriptional regulator	Regulator
CXB49_RS20110 (CXB49_20110)	-	4518803..4520359 (-)	1557	WP_101710010.1	nitrogen regulation protein NR(II)	-
CXB49_RS20115 (CXB49_20115)	parC	4520359..4522713 (-)	2355	WP_101710011.1	DNA topoisomerase IV subunit A	-
CXB49_RS20120 (CXB49_20120)	-	4522808..4523275 (+)	468	WP_101710012.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 439 a.a.
• Molecular weight: 47720.82 Da
• Isoelectric Point: 6.5208

>NTDB_id=261281 CXB49_RS20105 WP_101710009.1 4517491..4518810(-) (pilR) [Chromobacterium sp. ATCC 53434]
MTKTPLRVLVVDDEPDIRELLELTLAKMGLAPVCAGSVAEARSALAAGAFDLALTDMRLPDGEGLEVVRHIGEAGLDVPI
AVLTAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKSALRVESPARPAPQPRLLGESPAIRDVLRLVEKLARSQAAVY
ISGESGTGKEQAARLIHELGPRAGRPFVAVNCGAIPESLMESEFFGCRKGAFTGADADRDGFFQQTQGGTLFLDEVAELP
LAMQVKLLRAIQEKAVRRLGASQEEAVDARIICATHRDLAAGVEDGAFRQDLYYRLNVLPLKMPPLRELRDDIPLFAQRL
LRRYAGGDGAPQLTADALRALQDYAYPGNFRELENILERAVALASGPVLGRGELQLTPPAEHAPEPGSAEPLQDYLDRVE
REAIVKALDATRYNRTQAAKRLGLTFRSLRYRMERLGVK

Nucleotide

• Length: 1320 bp

>NTDB_id=261281 CXB49_RS20105 WP_101710009.1 4517491..4518810(-) (pilR) [Chromobacterium sp. ATCC 53434]
ATGACTAAGACACCGTTGCGCGTACTGGTCGTCGACGACGAACCCGACATCCGCGAGCTGCTGGAACTGACGCTGGCCAA
GATGGGCCTGGCGCCGGTGTGCGCCGGCAGCGTGGCCGAGGCGCGCAGCGCGCTGGCGGCCGGCGCCTTCGATCTGGCGC
TGACTGATATGCGGCTGCCCGACGGCGAGGGGCTGGAGGTGGTGCGCCATATCGGCGAGGCCGGCCTGGACGTGCCCATC
GCGGTGCTGACCGCCTACGGCAGCGCCGACAACGCGGTGCGGGCGATGAAGGCCGGCGCCTTCGATTATCTGCAAAAGCC
GGTCAGCCTGGCGCAACTGCGCAGCCTGGTGAAGTCGGCGCTGCGGGTGGAGTCGCCGGCCCGGCCGGCGCCGCAGCCGC
GGCTGTTGGGCGAATCGCCGGCGATACGGGACGTGTTGCGGCTGGTGGAGAAGCTGGCGCGCAGCCAGGCGGCGGTCTAC
ATCAGCGGCGAGTCCGGCACCGGCAAGGAGCAGGCGGCGCGGCTGATCCACGAACTGGGGCCGCGCGCCGGCCGGCCTTT
CGTCGCCGTCAACTGCGGCGCGATTCCGGAAAGCCTGATGGAGAGCGAGTTTTTCGGCTGCCGCAAGGGGGCCTTCACCG
GCGCCGACGCCGACCGCGACGGCTTCTTCCAGCAGACCCAGGGCGGCACGCTGTTTCTCGACGAGGTGGCCGAGCTGCCG
CTGGCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGGCCGTGCGTCGGCTGGGCGCCAGCCAGGAGGAGGCGGT
GGACGCGCGCATCATCTGCGCCACCCACCGGGACCTGGCGGCCGGGGTCGAGGACGGCGCCTTCCGCCAGGACCTGTACT
ACCGCCTGAATGTGCTGCCGCTGAAAATGCCGCCGCTGCGCGAGTTGCGCGACGACATTCCCTTGTTCGCCCAGCGGTTG
CTGCGGCGCTACGCCGGCGGCGACGGCGCGCCGCAGCTGACGGCCGACGCCTTGAGAGCGTTGCAGGACTACGCCTATCC
CGGCAACTTCCGCGAGCTGGAGAACATCCTGGAGCGGGCGGTGGCGCTGGCCTCCGGGCCGGTGCTGGGCCGCGGCGAGT
TGCAACTGACGCCGCCGGCCGAGCACGCGCCGGAGCCGGGCAGCGCCGAGCCGCTGCAGGACTATCTGGACCGCGTCGAG
CGCGAGGCCATCGTCAAGGCGCTGGACGCCACCCGCTACAACCGCACCCAGGCGGCCAAGCGGCTGGGCCTGACTTTCCG
TTCGCTGAGGTACCGGATGGAGCGGCTGGGAGTGAAGTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (135-301)

• Bacterial regulatory protein, Fis family (HTH_8) (396-435)

• Response regulator receiver domain (Response_reg) (8-117)

3D structure

• AlphaFold DB: A0A2H5E0X2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	60.317	100	0.606
pilR	Acinetobacter baumannii strain A118	44.541	100	0.465
luxO	Vibrio cholerae strain A1552	36.913	100	0.376