Detailed information NTG0026074

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HAC_RS04235
• Genome accession: NC_008229
• Coordinates: 864159..864959 (-)
• Length: 266 a.a.
• NCBI ID: WP_011577868.1
• Uniprot ID: Q17X69
• Organism: Helicobacter acinonychis str. Sheeba
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 859159..869959

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HAC_RS04200 (Hac_0977)	-	860019..860798 (-)	780	WP_041600281.1	hypothetical protein	-
HAC_RS04205	-	860782..861185 (-)	404	Protein_822	DUF1294 domain-containing protein	-
HAC_RS08935	-	861436..861856 (-)	421	Protein_823	lysozyme	-
HAC_RS04215 (Hac_0982)	-	861877..862437 (-)	561	WP_041600200.1	hypothetical protein	-
HAC_RS04220 (Hac_0983)	-	862421..862759 (-)	339	WP_011577865.1	hypothetical protein	-
HAC_RS04225 (Hac_0984)	-	862876..863433 (-)	558	WP_041600282.1	cysteine-rich Sel1 repeat protein	-
HAC_RS04230 (Hac_0986)	dprB	863758..864162 (-)	405	WP_011577867.1	Holliday junction resolvase RuvX	Machinery gene
HAC_RS04235 (Hac_0987)	dprA	864159..864959 (-)	801	WP_011577868.1	DNA-processing protein DprA	Machinery gene
HAC_RS04240 (Hac_0988)	minE	864966..865199 (-)	234	WP_000051430.1	cell division topological specificity factor MinE	-
HAC_RS04245 (Hac_0989)	minD	865196..866002 (-)	807	WP_011577869.1	septum site-determining protein MinD	-
HAC_RS04250 (Hac_0990)	ilvC	866025..867017 (-)	993	WP_011577870.1	ketol-acid reductoisomerase	-
HAC_RS04260 (Hac_0991)	-	867273..868055 (+)	783	WP_011577871.1	NAD+ synthase	-
HAC_RS04265 (Hac_0992)	-	868052..868990 (+)	939	WP_011577872.1	tetraacyldisaccharide 4'-kinase	-
HAC_RS04270 (Hac_0993)	pseH	868923..869465 (-)	543	WP_011577873.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29875.73 Da
• Isoelectric Point: 8.4051

>NTDB_id=26074 HAC_RS04235 WP_011577868.1 864159..864959(-) (dprA) [Helicobacter acinonychis str. Sheeba]
MKSNFQYSALEGIPKVFDILKDPPKKLYFIGNTVLLNAPLKVAIIGTRRPTPYSKQHTITLAKELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDVVIIPQADLQSG
SMSSARLAQKYQRPLFVLPQRLNESDGTNELLEKGQAQGIFNIHHFINTLLKDYHLQEMHENKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=26074 HAC_RS04235 WP_011577868.1 864159..864959(-) (dprA) [Helicobacter acinonychis str. Sheeba]
ATGAAAAGTAACTTCCAATATAGTGCACTAGAAGGTATCCCTAAAGTTTTTGACATTCTTAAAGACCCCCCTAAAAAGCT
CTACTTTATAGGCAATACCGTTCTCTTAAATGCACCTTTAAAAGTGGCTATCATAGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCTAAAGAGCTTGCTAAAAATGGTGCGGTTATTGTGAGTGGGGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCGAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACTAA
TAACCATAAAGTGATCCAAGAAATCGCACAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCTTAGTGATCGCTTTAAGCGATGTAGTGATTATCCCTCAAGCGGATTTACAAAGCGGT
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAGACCCTTATTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAACATTCATCATTTTATAAACACCCTTTTAAAAGATT
ATCATTTACAAGAAATGCATGAAAATAAAGATGAATTTTTAGAATATTGTGCGAAAAACCCTAGTTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAACTTTTAGAATACGAGCTACTAGGCAAGATTAAGCGCATCAATCATATCGTAGTGTTAGCATG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (14-197)

3D structure

• AlphaFold DB: Q17X69

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	92.481	100	0.925
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	47.598	86.09	0.41