Detailed information NTG0260198

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CXR48_RS16720
• Genome accession: NZ_CP025341
• Coordinates: 3400587..3401750 (-)
• Length: 387 a.a.
• NCBI ID: WP_003151385.1
• Uniprot ID: -
• Organism: Bacillus velezensis strain CMT-6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3395587..3406750

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CXR48_RS16690	-	3395852..3396271 (-)	420	WP_003151392.1	TIGR03826 family flagellar region protein	-
CXR48_RS16695	comFC	3396345..3397034 (-)	690	WP_196616643.1	phosphoribosyltransferase family protein	Machinery gene
CXR48_RS16700	-	3397040..3397324 (-)	285	WP_003151389.1	late competence development ComFB family protein	-
CXR48_RS16705	comFA	3397382..3398767 (-)	1386	WP_024085865.1	DEAD/DEAH box helicase	Machinery gene
CXR48_RS16710	-	3398875..3399723 (-)	849	WP_024085866.1	DegV family protein	-
CXR48_RS16715	degU	3399821..3400510 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
CXR48_RS16720	degS	3400587..3401750 (-)	1164	WP_003151385.1	two-component sensor histidine kinase DegS	Regulator
CXR48_RS16725	-	3401973..3402620 (+)	648	WP_003151384.1	YigZ family protein	-
CXR48_RS16730	-	3402625..3403839 (+)	1215	WP_014305930.1	LCP family protein	-
CXR48_RS16735	-	3403929..3405005 (-)	1077	WP_003151382.1	glycosyltransferase family 4 protein	-
CXR48_RS16740	tuaH	3405138..3406334 (-)	1197	WP_069013672.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45014.82 Da
• Isoelectric Point: 7.1378

>NTDB_id=260198 CXR48_RS16720 WP_003151385.1 3400587..3401750(-) (degS) [Bacillus velezensis strain CMT-6]
MNKSKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDIKDAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=260198 CXR48_RS16720 WP_003151385.1 3400587..3401750(-) (degS) [Bacillus velezensis strain CMT-6]
ATGAATAAATCGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTTGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTTGAAGTTCATACGCGGCACGCACGAAACCGCTTGTCTGAAGTGAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTTCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTAGGGCTTCTTCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGCTTAAGAATCATTGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGTCCCGCGCAGATGCTGGCAAATGTCATGATGAGATCGGAATTAATTGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGATTTCAGGAAATCAGAAATCTTCGGCAGAATGTGCGGAATGCCCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCTACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGTATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTCAAACATTCAGAATCAGAGGAAATAACAGTAAAAGTGGAAGTA
ACCGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATTAAGGATGCTAAACAAAAGAAAAACAA
GTCATTTGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.325	99.483	0.948