Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | CV094_RS08305 | Genome accession | NZ_CP025266 |
| Coordinates | 1732153..1732635 (-) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii isolate SMC_Paed_Ab_BL01 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1727153..1737635
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV094_RS08270 (CV094_08270) | - | 1727259..1728293 (+) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
| CV094_RS08275 (CV094_08275) | - | 1728408..1729349 (+) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| CV094_RS08280 (CV094_08280) | rplS | 1729402..1729770 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| CV094_RS08285 (CV094_08285) | trmD | 1729979..1730719 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CV094_RS08290 (CV094_08290) | rimM | 1730765..1731313 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| CV094_RS08295 (CV094_08295) | rpsP | 1731333..1731584 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| CV094_RS08300 (CV094_08300) | pilE | 1731731..1732156 (-) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| CV094_RS08305 (CV094_08305) | pilY2 | 1732153..1732635 (-) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| CV094_RS08310 (CV094_08310) | pilY1 | 1732648..1736502 (-) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| CV094_RS08315 (CV094_08315) | pilX | 1736514..1737332 (-) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=259657 CV094_RS08305 WP_001046420.1 1732153..1732635(-) (pilY2) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=259657 CV094_RS08305 WP_001046420.1 1732153..1732635(-) (pilY2) [Acinetobacter baumannii isolate SMC_Paed_Ab_BL01]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |