Detailed information NTG0025960

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: HPAG1_RS01750
• Genome accession: NC_008086
• Coordinates: 347009..347809 (+)
• Length: 266 a.a.
• NCBI ID: WP_000840095.1
• Uniprot ID: -
• Organism: Helicobacter pylori HPAG1
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 342009..352809

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
HPAG1_RS01715 (HPAG1_0331)	pseH	342504..343046 (+)	543	WP_000742653.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
HPAG1_RS01720 (HPAG1_0332)	-	342979..343917 (-)	939	WP_000833918.1	tetraacyldisaccharide 4'-kinase	-
HPAG1_RS01725 (HPAG1_0333)	-	343914..344696 (-)	783	WP_001168295.1	NAD+ synthase	-
HPAG1_RS01735 (HPAG1_0334)	ilvC	344945..345937 (+)	993	WP_001207766.1	ketol-acid reductoisomerase	-
HPAG1_RS01740 (HPAG1_0335)	minD	345961..346767 (+)	807	WP_001019065.1	septum site-determining protein MinD	-
HPAG1_RS01745 (HPAG1_0336)	minE	346764..346997 (+)	234	WP_000051514.1	cell division topological specificity factor MinE	-
HPAG1_RS01750 (HPAG1_0337)	dprA	347009..347809 (+)	801	WP_000840095.1	DNA-processing protein DprA	Machinery gene
HPAG1_RS01755 (HPAG1_0338)	dprB	347806..348210 (+)	405	WP_000599189.1	Holliday junction resolvase RuvX	Machinery gene
HPAG1_RS01760 (HPAG1_0339)	-	348342..348908 (+)	567	WP_001118308.1	tetratricopeptide repeat protein	-
HPAG1_RS01765 (HPAG1_0340)	-	349095..349433 (+)	339	WP_000699939.1	hypothetical protein	-
HPAG1_RS01770 (HPAG1_0341)	-	349417..349977 (+)	561	WP_000038878.1	hypothetical protein	-
HPAG1_RS01775 (HPAG1_0342)	-	350080..350961 (-)	882	WP_001117138.1	RluA family pseudouridine synthase	-
HPAG1_RS01780 (HPAG1_0343)	recJ	350961..352511 (-)	1551	WP_000810695.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29893.86 Da
• Isoelectric Point: 8.8842

>NTDB_id=25960 HPAG1_RS01750 WP_000840095.1 347009..347809(+) (dprA) [Helicobacter pylori HPAG1]
MKSNFQYSALENIPKAFDILKDPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNRAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=25960 HPAG1_RS01750 WP_000840095.1 347009..347809(+) (dprA) [Helicobacter pylori HPAG1]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACAAAGCTTTTGGATGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACGATCACCCTAGCCAGAGAGCTTGCTAAAAATCGCGCGGTTATTGTGAGTGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCTTTGCCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTGTTTGTTTTACCCCAACGCTTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGATT
ATCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGCGCCAAAAACCCTAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	49.537	81.203	0.402