Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | HPAG1_RS01755 | Genome accession | NC_008086 |
| Coordinates | 347806..348210 (+) | Length | 134 a.a. |
| NCBI ID | WP_000599189.1 | Uniprot ID | Q1CUG7 |
| Organism | Helicobacter pylori HPAG1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 342806..353210
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HPAG1_RS01720 (HPAG1_0332) | - | 342979..343917 (-) | 939 | WP_000833918.1 | tetraacyldisaccharide 4'-kinase | - |
| HPAG1_RS01725 (HPAG1_0333) | - | 343914..344696 (-) | 783 | WP_001168295.1 | NAD+ synthase | - |
| HPAG1_RS01735 (HPAG1_0334) | ilvC | 344945..345937 (+) | 993 | WP_001207766.1 | ketol-acid reductoisomerase | - |
| HPAG1_RS01740 (HPAG1_0335) | minD | 345961..346767 (+) | 807 | WP_001019065.1 | septum site-determining protein MinD | - |
| HPAG1_RS01745 (HPAG1_0336) | minE | 346764..346997 (+) | 234 | WP_000051514.1 | cell division topological specificity factor MinE | - |
| HPAG1_RS01750 (HPAG1_0337) | dprA | 347009..347809 (+) | 801 | WP_000840095.1 | DNA-processing protein DprA | Machinery gene |
| HPAG1_RS01755 (HPAG1_0338) | dprB | 347806..348210 (+) | 405 | WP_000599189.1 | Holliday junction resolvase RuvX | Machinery gene |
| HPAG1_RS01760 (HPAG1_0339) | - | 348342..348908 (+) | 567 | WP_001118308.1 | tetratricopeptide repeat protein | - |
| HPAG1_RS01765 (HPAG1_0340) | - | 349095..349433 (+) | 339 | WP_000699939.1 | hypothetical protein | - |
| HPAG1_RS01770 (HPAG1_0341) | - | 349417..349977 (+) | 561 | WP_000038878.1 | hypothetical protein | - |
| HPAG1_RS01775 (HPAG1_0342) | - | 350080..350961 (-) | 882 | WP_001117138.1 | RluA family pseudouridine synthase | - |
| HPAG1_RS01780 (HPAG1_0343) | recJ | 350961..352511 (-) | 1551 | WP_000810695.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15211.60 Da Isoelectric Point: 7.7760
>NTDB_id=25961 HPAG1_RS01755 WP_000599189.1 347806..348210(+) (dprB) [Helicobacter pylori HPAG1]
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDNSSIEAYENLEHLGKKNKWLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRQNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEHFIKLVDFKGE
IVFINEDNSSIEAYENLEHLGKKNKWLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=25961 HPAG1_RS01755 WP_000599189.1 347806..348210(+) (dprB) [Helicobacter pylori HPAG1]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCAAAATAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCACGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGATAATTCTAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGTGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTGGAACGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATCGCTGCGCTTTTAAACGGCGTTATCTTGCCTTTAGAAGC
GATTTTACGCCAAAATAGGAATCAGGCCTCTAGGGATTTGAGCGATTTGTTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCCAATGAAAGCTATGCGGATACGAACGCACGCATTGAGCATTTTATCAAGCTTGTAGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGATAATTCTAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGTAAGAAAAACAAGTGGCT
CGCTATTAAAGACGGCCGGTTAGACTCTTTGAGCGCTTGCAGGATCTTGGAACGCTATTGCCAGCAGGTTTTAAAAAATC
ATTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
96.269 |
100 |
0.963 |