Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | CXL10_RS00635 | Genome accession | NZ_CP025220 |
| Coordinates | 105769..106251 (+) | Length | 160 a.a. |
| NCBI ID | WP_058831697.1 | Uniprot ID | - |
| Organism | Listeria monocytogenes strain PIR00546 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 100769..111251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CXL10_RS00570 (CXL10_00570) | - | 100834..101811 (+) | 978 | WP_003743364.1 | DNA cytosine methyltransferase | - |
| CXL10_RS00575 (CXL10_00575) | - | 101808..102002 (+) | 195 | WP_003735028.1 | hypothetical protein | - |
| CXL10_RS00580 (CXL10_00580) | - | 102029..102634 (+) | 606 | WP_003743367.1 | DUF1642 domain-containing protein | - |
| CXL10_RS00585 (CXL10_00585) | - | 102631..102810 (+) | 180 | WP_003735032.1 | hypothetical protein | - |
| CXL10_RS00590 (CXL10_00590) | - | 102807..102992 (+) | 186 | WP_003735031.1 | hypothetical protein | - |
| CXL10_RS00595 (CXL10_00595) | - | 102989..103492 (+) | 504 | WP_003743369.1 | YopX family protein | - |
| CXL10_RS00600 (CXL10_00600) | - | 103492..104193 (+) | 702 | WP_003743371.1 | hypothetical protein | - |
| CXL10_RS00605 (CXL10_00605) | - | 104206..104475 (+) | 270 | WP_003735015.1 | hypothetical protein | - |
| CXL10_RS00610 (CXL10_00610) | - | 104472..104657 (+) | 186 | WP_003735014.1 | hypothetical protein | - |
| CXL10_RS00615 (CXL10_00615) | - | 104654..104944 (+) | 291 | WP_003735013.1 | hypothetical protein | - |
| CXL10_RS00620 (CXL10_00620) | - | 104944..105129 (+) | 186 | WP_003743374.1 | hypothetical protein | - |
| CXL10_RS00625 (CXL10_00625) | - | 105130..105357 (+) | 228 | WP_003743375.1 | ASCH/PUA domain-containing protein | - |
| CXL10_RS00630 (CXL10_00630) | - | 105368..105769 (+) | 402 | WP_003743377.1 | hypothetical protein | - |
| CXL10_RS00635 (CXL10_00635) | ssbA | 105769..106251 (+) | 483 | WP_058831697.1 | single-stranded DNA-binding protein | Machinery gene |
| CXL10_RS00640 (CXL10_00640) | - | 106283..106588 (+) | 306 | WP_039382681.1 | hypothetical protein | - |
| CXL10_RS00645 | - | 106585..106725 (+) | 141 | WP_003759675.1 | BH0509 family protein | - |
| CXL10_RS00650 (CXL10_00645) | - | 106691..107095 (+) | 405 | WP_031644573.1 | endodeoxyribonuclease | - |
| CXL10_RS00655 (CXL10_00650) | - | 107224..107388 (+) | 165 | WP_031644575.1 | hypothetical protein | - |
| CXL10_RS00660 (CXL10_00655) | - | 107407..107841 (+) | 435 | WP_003735131.1 | ArpU family phage packaging/lysis transcriptional regulator | - |
| CXL10_RS00665 (CXL10_00660) | - | 108102..108641 (+) | 540 | WP_003727778.1 | hypothetical protein | - |
| CXL10_RS00670 (CXL10_00665) | - | 108687..109229 (+) | 543 | WP_003743392.1 | terminase small subunit | - |
| CXL10_RS00675 (CXL10_00670) | - | 109198..110529 (+) | 1332 | WP_020830818.1 | PBSX family phage terminase large subunit | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17831.67 Da Isoelectric Point: 5.0001
>NTDB_id=258981 CXL10_RS00635 WP_058831697.1 105769..106251(+) (ssbA) [Listeria monocytogenes strain PIR00546]
MMNRVVLVGRLTKDPELRYTPAGLAVATFTLAVNRAFTNQNGEREADFIQCVVWRKPAENVANFLKKGSLAGVDGRIQTR
NYEDNDGKRVFVTEVVAETVQFLEPKNNNAEGATSNNYQNQANYSNNNKTSSYRADTSQKSDSFASEGKPIDINEDDLPF
MMNRVVLVGRLTKDPELRYTPAGLAVATFTLAVNRAFTNQNGEREADFIQCVVWRKPAENVANFLKKGSLAGVDGRIQTR
NYEDNDGKRVFVTEVVAETVQFLEPKNNNAEGATSNNYQNQANYSNNNKTSSYRADTSQKSDSFASEGKPIDINEDDLPF
Nucleotide
Download Length: 483 bp
>NTDB_id=258981 CXL10_RS00635 WP_058831697.1 105769..106251(+) (ssbA) [Listeria monocytogenes strain PIR00546]
ATGATGAATCGTGTAGTACTTGTAGGACGATTAACGAAAGACCCTGAATTACGTTACACTCCAGCTGGATTAGCTGTTGC
GACTTTTACATTAGCTGTAAACCGCGCTTTCACTAATCAGAATGGAGAACGAGAAGCCGACTTTATTCAATGTGTTGTTT
GGCGTAAACCAGCGGAAAATGTTGCTAATTTCTTGAAAAAAGGAAGCTTGGCAGGCGTCGATGGACGCATACAGACTCGA
AATTACGAAGATAACGACGGAAAACGCGTTTTTGTTACTGAAGTAGTTGCTGAAACAGTTCAATTCTTAGAGCCTAAAAA
TAACAACGCAGAAGGCGCTACATCGAATAATTATCAAAACCAAGCTAATTATTCAAATAACAATAAAACAAGCTCATATA
GAGCGGATACGAGCCAGAAGAGCGATTCATTTGCAAGTGAAGGTAAGCCGATTGATATTAATGAAGATGATTTGCCATTT
TGA
ATGATGAATCGTGTAGTACTTGTAGGACGATTAACGAAAGACCCTGAATTACGTTACACTCCAGCTGGATTAGCTGTTGC
GACTTTTACATTAGCTGTAAACCGCGCTTTCACTAATCAGAATGGAGAACGAGAAGCCGACTTTATTCAATGTGTTGTTT
GGCGTAAACCAGCGGAAAATGTTGCTAATTTCTTGAAAAAAGGAAGCTTGGCAGGCGTCGATGGACGCATACAGACTCGA
AATTACGAAGATAACGACGGAAAACGCGTTTTTGTTACTGAAGTAGTTGCTGAAACAGTTCAATTCTTAGAGCCTAAAAA
TAACAACGCAGAAGGCGCTACATCGAATAATTATCAAAACCAAGCTAATTATTCAAATAACAATAAAACAAGCTCATATA
GAGCGGATACGAGCCAGAAGAGCGATTCATTTGCAAGTGAAGGTAAGCCGATTGATATTAATGAAGATGATTTGCCATTT
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
64.535 |
100 |
0.694 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
54.706 |
100 |
0.581 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
64.151 |
66.25 |
0.425 |