Detailed information NTG0258589

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: DOU34_RS12805
• Genome accession: NZ_CP030097
• Coordinates: 2624528..2625532 (-)
• Length: 334 a.a.
• NCBI ID: WP_015240399.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain SH-B74
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2619528..2630532

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DOU34_RS12780	-	2620491..2621123 (+)	633	WP_007408771.1	GNAT family N-acetyltransferase	-
DOU34_RS12785	-	2621148..2621792 (+)	645	WP_007408772.1	acetoin utilization AcuB family protein	-
DOU34_RS12790	-	2621789..2622955 (+)	1167	WP_007408773.1	acetoin utilization protein AcuC	-
DOU34_RS12795	motS	2622965..2623654 (-)	690	WP_032871679.1	flagellar motor protein MotS	-
DOU34_RS12800	motP	2623644..2624459 (-)	816	WP_007408775.1	flagellar motor protein MotP	-
DOU34_RS12805	ccpA	2624528..2625532 (-)	1005	WP_015240399.1	catabolite control protein A	Regulator
DOU34_RS12810	-	2625812..2626888 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
DOU34_RS12815	ytxJ	2627125..2627451 (-)	327	WP_007408776.1	bacillithiol system redox-active protein YtxJ	-
DOU34_RS12820	-	2627477..2627890 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
DOU34_RS12825	-	2627923..2628345 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
DOU34_RS12830	murC	2628501..2629799 (-)	1299	WP_032871677.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36920.26 Da
• Isoelectric Point: 4.8365

>NTDB_id=258589 DOU34_RS12805 WP_015240399.1 2624528..2625532(-) (ccpA) [Bacillus amyloliquefaciens strain SH-B74]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIALVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEQIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=258589 DOU34_RS12805 WP_015240399.1 2624528..2625532(-) (ccpA) [Bacillus amyloliquefaciens strain SH-B74]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGATCGGCTCGGCTATCGCCCGAATGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTTGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCACTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGCTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATTCC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCAGATCGTC
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	53.939	98.802	0.533
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.03	98.802	0.524
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503