Detailed information NTG0258589

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: CW750_RS09860
• Genome accession: NZ_CP025136
• Coordinates: 1972939..1973646 (-)
• Length: 235 a.a.
• NCBI ID: WP_226474265.1
• Uniprot ID: -
• Organism: Latilactobacillus sakei strain WiKim0072
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1967939..1978646

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CW750_RS09835 (CW750_09845)	rpsO	1968233..1968502 (-)	270	WP_011374766.1	30S ribosomal protein S15	-
CW750_RS09840 (CW750_09850)	rpsT	1968781..1969035 (+)	255	WP_011374767.1	30S ribosomal protein S20	-
CW750_RS09845 (CW750_09855)	holA	1969104..1970132 (-)	1029	WP_061826985.1	DNA polymerase III subunit delta	-
CW750_RS09850 (CW750_09860)	comEC	1970129..1972195 (-)	2067	WP_226474266.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CW750_RS09855 (CW750_09865)	-	1972393..1972881 (-)	489	WP_011374770.1	ComE operon protein 2	-
CW750_RS09860 (CW750_09870)	comEA	1972939..1973646 (-)	708	WP_226474265.1	helix-hairpin-helix domain-containing protein	Machinery gene
CW750_RS09865 (CW750_09875)	-	1973720..1974766 (-)	1047	WP_061826983.1	SepM family pheromone-processing serine protease	-
CW750_RS09870 (CW750_09880)	coaD	1974768..1975265 (-)	498	WP_061826982.1	pantetheine-phosphate adenylyltransferase	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 26122.75 Da
• Isoelectric Point: 9.7683

>NTDB_id=258589 CW750_RS09860 WP_226474265.1 1972939..1973646(-) (comEA) [Latilactobacillus sakei strain WiKim0072]
MMWQDYWQRYRRFWWVPCLVLLGIITGGFYWHQTQQKQKVTHNEQLLATSASKIKPATKKTHQAATKKKGGFVDIKGAVA
YPGIYPITVSETRLFEVLKNAGGPTDAADTKRLNLAQKLTDQLIIYIPKKGEVVTDQELIQAPQQIATTSERTPEQASTG
TSANASSASDTAKIDLNQADSTQLQTLNGIGPKKAEQIIAYRDEQGKFKQIEDLQKVGGIGPKTFEQLQSQICVN

Nucleotide

• Length: 708 bp

>NTDB_id=258589 CW750_RS09860 WP_226474265.1 1972939..1973646(-) (comEA) [Latilactobacillus sakei strain WiKim0072]
ATGATGTGGCAAGATTATTGGCAGCGATATCGGCGTTTTTGGTGGGTGCCTTGCTTAGTGCTATTGGGGATCATCACGGG
TGGCTTTTATTGGCATCAAACGCAACAAAAACAAAAAGTAACGCATAATGAGCAACTGCTAGCAACCAGTGCGTCTAAAA
TAAAACCTGCTACTAAGAAAACACACCAAGCGGCAACCAAGAAAAAAGGCGGTTTTGTCGATATAAAAGGTGCTGTGGCT
TATCCGGGAATTTATCCGATCACAGTCTCTGAAACGCGCTTATTTGAGGTGCTCAAAAATGCAGGTGGTCCGACTGATGC
GGCTGATACCAAGCGGCTTAATTTAGCCCAAAAATTAACCGATCAACTGATTATTTATATTCCGAAAAAAGGAGAGGTGG
TTACTGATCAAGAACTCATTCAAGCGCCACAACAAATTGCAACGACCAGTGAGCGTACGCCAGAACAAGCATCAACTGGG
ACAAGTGCGAATGCATCGAGCGCGAGTGACACTGCTAAAATCGATTTGAATCAGGCTGATAGTACGCAGCTTCAGACCCT
CAATGGCATTGGCCCCAAGAAAGCTGAACAAATAATTGCTTATCGTGATGAACAAGGAAAATTTAAACAGATTGAAGATC
TACAAAAAGTCGGCGGGATTGGTCCGAAGACGTTTGAACAATTGCAATCACAAATTTGTGTGAATTAG

Domains

Predicted by InterproScan.

• SLBB domain (SLBB) (73-124)

• Helix-hairpin-helix motif (HHH_3) (172-233)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Latilactobacillus sakei subsp. sakei 23K	97.021	100	0.97