Detailed information    

insolico Bioinformatically predicted

Overview

Name   ccpA   Type   Regulator
Locus tag   CWI26_RS08400 Genome accession   NZ_CP025043
Coordinates   1705515..1706519 (-) Length   334 a.a.
NCBI ID   WP_002935813.1    Uniprot ID   A0A0K2E7G3
Organism   Streptococcus suis strain AH681     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 1700515..1711519
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWI26_RS08385 (CWI26_08385) - 1700542..1701855 (-) 1314 WP_004298833.1 glycosyltransferase family 4 protein -
  CWI26_RS08390 (CWI26_08390) - 1701856..1702854 (-) 999 WP_029185556.1 glycosyltransferase family 4 protein -
  CWI26_RS08395 (CWI26_08395) - 1703163..1705082 (+) 1920 WP_100881583.1 Spy0128 family protein -
  CWI26_RS08400 (CWI26_08400) ccpA 1705515..1706519 (-) 1005 WP_002935813.1 catabolite control protein A Regulator
  CWI26_RS08405 (CWI26_08405) - 1706728..1707813 (+) 1086 WP_100881584.1 M24 family metallopeptidase -
  CWI26_RS08410 (CWI26_08410) tgt 1707852..1708994 (-) 1143 WP_100881585.1 tRNA guanosine(34) transglycosylase Tgt -
  CWI26_RS08420 (CWI26_08420) - 1709596..1710438 (+) 843 WP_100881587.1 DUF975 family protein -
  CWI26_RS08425 (CWI26_08425) - 1710733..1711170 (-) 438 WP_014636445.1 CoA-binding protein -

Sequence

Protein


Download         Length: 334 a.a.        Molecular weight: 36772.94 Da        Isoelectric Point: 5.5173

>NTDB_id=257619 CWI26_RS08400 WP_002935813.1 1705515..1706519(-) (ccpA) [Streptococcus suis strain AH681]
MLNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNIANAYF
ATLAKGIDDIADMYKYNIVLANSDENDEKEINVVNTLFSKQVDGIIFMGYHLTDKIRAEFSRSRTPIVLAGTVDLEHQLP
SVNIDYAAASVDAVNLLAKNNKKIAFVSGPLVDDINGKVRFAGYKQGLKDNGIEFNEGLVFESKYKYEEGYALAERILNA
GATAAYVAEDEIAAGLLNGVSDMGVKVPEDFEIITSDDSLVTKFTRPNLTSINQPLYDIGAIAMRMLTKIMHKEELENRE
VVLNHGIKVRKSTK

Nucleotide


Download         Length: 1005 bp        

>NTDB_id=257619 CWI26_RS08400 WP_002935813.1 1705515..1706519(-) (ccpA) [Streptococcus suis strain AH681]
ATGTTAAACACTGATGATACGGTTACGATTTACGATGTCGCCCGTGAAGCAGGTGTATCCATGGCGACAGTATCGCGCGT
GGTAAATGGGAATAAAAACGTAAAGGAAAATACTCGTAAAAAAGTATTAGAAGTCATCGACCGTTTGGATTATCGTCCAA
ATGCTGTTGCGCGTGGCTTGGCAAGTAAAAAAACGACAACTGTAGGGGTTGTGATTCCAAATATTGCTAACGCCTATTTT
GCAACCTTGGCCAAAGGTATCGATGATATTGCCGATATGTACAAATACAATATCGTCCTAGCAAACAGTGATGAAAATGA
TGAGAAAGAAATCAATGTGGTAAATACCCTATTCTCAAAACAGGTGGACGGAATCATTTTCATGGGCTATCATTTGACAG
ACAAGATTCGTGCGGAGTTTTCACGCTCACGTACACCGATTGTTTTAGCTGGTACCGTGGACTTGGAGCACCAATTACCT
AGCGTCAATATTGATTATGCTGCCGCTAGTGTTGATGCAGTCAATCTATTAGCTAAGAACAACAAGAAAATTGCCTTTGT
ATCAGGACCGCTTGTAGATGACATCAACGGTAAAGTTCGTTTTGCAGGCTACAAACAAGGCTTGAAGGACAACGGAATCG
AGTTTAACGAAGGATTGGTTTTTGAATCCAAGTATAAATACGAGGAAGGCTACGCTCTAGCAGAACGTATTTTGAATGCT
GGAGCAACTGCAGCTTATGTTGCAGAAGATGAGATTGCTGCTGGTCTATTGAATGGTGTCAGTGATATGGGTGTCAAGGT
TCCAGAAGACTTTGAAATCATCACAAGTGATGATTCCCTAGTGACCAAGTTTACCCGTCCAAACCTGACCTCTATCAATC
AGCCACTATATGATATTGGTGCAATTGCTATGCGCATGCTTACCAAAATCATGCACAAGGAAGAGTTGGAAAACCGTGAG
GTAGTTCTTAACCACGGAATCAAAGTACGGAAATCAACTAAGTGA

Domains

Predicted by InterproScan.

Periplasmic binding protein-like domain (Peripla_BP_3)

(176-333)

Bacterial regulatory proteins, lacI family (LacI)

(9-54)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0K2E7G3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

80.18

99.701

0.799
  ccpA Streptococcus gordonii str. Challis substr. CH1

79.58

99.701

0.793
  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

59.215

99.102

0.587

Multiple sequence alignment