Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   CWD84_RS04975 Genome accession   NZ_CP025001
Coordinates   945490..947796 (+) Length   768 a.a.
NCBI ID   WP_060964422.1    Uniprot ID   A0AAI8HLI4
Organism   Bacillus siamensis strain SCSIO 05746     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 940490..952796
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CWD84_RS04945 (CWD84_04945) - 942078..943301 (+) 1224 WP_060964420.1 EAL and HDOD domain-containing protein -
  CWD84_RS04950 (CWD84_04950) - 943306..943647 (-) 342 WP_060964421.1 hypothetical protein -
  CWD84_RS04960 (CWD84_04960) degQ 944113..944253 (+) 141 WP_013353398.1 degradation enzyme regulation protein DegQ Regulator
  CWD84_RS04965 (CWD84_04965) - 944405..945280 (+) 876 WP_060965112.1 polyprenyl synthetase family protein -
  CWD84_RS04970 (CWD84_04970) comX 945295..945471 (+) 177 WP_044052947.1 competence pheromone ComX -
  CWD84_RS04975 (CWD84_04975) comP 945490..947796 (+) 2307 WP_060964422.1 sensor histidine kinase Regulator
  CWD84_RS04980 (CWD84_04980) comA 947877..948521 (+) 645 WP_016938117.1 response regulator transcription factor Regulator
  CWD84_RS04985 (CWD84_04985) - 948543..948926 (+) 384 WP_060964423.1 hotdog fold thioesterase -
  CWD84_RS04990 (CWD84_04990) mnhG 948966..949340 (-) 375 WP_060964424.1 monovalent cation/H(+) antiporter subunit G -
  CWD84_RS04995 (CWD84_04995) - 949324..949608 (-) 285 WP_016938120.1 Na(+)/H(+) antiporter subunit F1 -
  CWD84_RS05000 (CWD84_05000) - 949608..950084 (-) 477 WP_060964425.1 Na+/H+ antiporter subunit E -
  CWD84_RS05005 (CWD84_05005) - 950090..951571 (-) 1482 WP_060964426.1 Na+/H+ antiporter subunit D -
  CWD84_RS05010 (CWD84_05010) - 951564..951905 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  CWD84_RS05015 (CWD84_05015) - 951905..952336 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89353.62 Da        Isoelectric Point: 8.3550

>NTDB_id=257067 CWD84_RS04975 WP_060964422.1 945490..947796(+) (comP) [Bacillus siamensis strain SCSIO 05746]
MKKFIRNFSIVLLFVSLFYVAHIIYFTQNGILVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNRKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAYILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTAIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVFVFLIFLAVFYIKEVLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEISSDGDILYFDKQNSEPNWQPYKKEFDKVTSEIGKII
EVNQGFLMKIGERGANSYILLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKREEPCQLEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=257067 CWD84_RS04975 WP_060964422.1 945490..947796(+) (comP) [Bacillus siamensis strain SCSIO 05746]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGCTCATATTATATATTTTAC
TCAAAACGGAATTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATCGTAAAATAGACCTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCATTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTCTTGGAAATGATGGTCGTCTATACAGCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTGTTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAACAAAATCTACGATATAGACTTCCTGTTGGGCAGAATTAGATACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGAAATAACTTCAATATTATTCAGATCACTGTATTTGTTT
TTTTAATTTTCTTGGCGGTATTTTATATTAAGGAGGTATTAGACTACAAATTCCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGTGTGTCAGCTTTAAACCAAGTGTTTATGAATCTTAA
AAAGACGATATTAGATGTGTTGCCTGTCAGTAAGGCATATATCTTTGAAATCAGTTCTGACGGAGATATTCTGTATTTTG
ATAAACAGAACAGCGAACCGAACTGGCAGCCGTATAAAAAAGAATTTGATAAAGTTACATCAGAGATTGGGAAGATTATT
GAAGTAAATCAAGGTTTTCTGATGAAGATCGGAGAAAGAGGCGCCAATTCATACATTCTGCTCTGTTTATCCAGCATTAA
TACCCCGAGGCTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAATCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGGTCGGATCTGGCCCGTGATCTGCATGATTCGGTGCTGCAGGATTTGATTTCTTTGAA
GCGTCAGTGTGAGCTGTTTCTGGCTGATTTTAAAAGAGAAGAGCCTTGCCAGTTAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGGCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGACG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAATGCCATGAAGC
ATTCACAGGCCAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGATGACGGGGTC
GGGTGCAATCAGGAAGAAGGCGGCGGACAGTCGATGAGCATGGGGCTTTCGGGCATTAAGGAGCGCGTCCGGGCGCTTGA
CGGCCGGATGAAAATCGACACAAGTGAAGGAAATGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.533

100

0.598

Multiple sequence alignment