Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   CVO91_RS12910 Genome accession   NZ_CP024974
Coordinates   2537928..2538692 (+) Length   254 a.a.
NCBI ID   WP_004195351.1    Uniprot ID   A0A0Z8GL71
Organism   Streptococcus suis strain CZ130302     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2532928..2543692
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS12865 (CVO91_12865) - 2532968..2533174 (+) 207 WP_002941576.1 hypothetical protein -
  CVO91_RS12870 (CVO91_12870) - 2533128..2534480 (+) 1353 WP_004195537.1 IS66-like element short variant transposase -
  CVO91_RS12875 (CVO91_12875) - 2534681..2534836 (-) 156 WP_241033702.1 hypothetical protein -
  CVO91_RS12895 (CVO91_12895) - 2535310..2535993 (-) 684 WP_002941740.1 YoaK family protein -
  CVO91_RS12900 (CVO91_12900) rlmH 2536018..2536497 (-) 480 WP_002941741.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  CVO91_RS12905 (CVO91_12905) htrA 2536671..2537867 (+) 1197 WP_004195348.1 trypsin-like peptidase domain-containing protein Regulator
  CVO91_RS12910 (CVO91_12910) spo0J 2537928..2538692 (+) 765 WP_004195351.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 254 a.a.        Molecular weight: 28994.26 Da        Isoelectric Point: 9.1678

>NTDB_id=256952 CVO91_RS12910 WP_004195351.1 2537928..2538692(+) (spo0J) [Streptococcus suis strain CZ130302]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGQISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAVNKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=256952 CVO91_RS12910 WP_004195351.1 2537928..2538692(+) (spo0J) [Streptococcus suis strain CZ130302]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCCATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATTGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAGGAA
CTAACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCGGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACGCATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGACAAATTTCACAAGGGCACGCG
CGACAATTAGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGTAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGGATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0Z8GL71

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547


Multiple sequence alignment