Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CVO91_RS03545 Genome accession   NZ_CP024974
Coordinates   652805..653608 (+) Length   267 a.a.
NCBI ID   WP_004298858.1    Uniprot ID   A0A0Z8N7Q9
Organism   Streptococcus suis strain CZ130302     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 647805..658608
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CVO91_RS03520 (CVO91_03520) - 648234..648932 (-) 699 WP_004298848.1 amino acid ABC transporter permease -
  CVO91_RS03525 (CVO91_03525) - 648947..649786 (-) 840 WP_004298850.1 transporter substrate-binding domain-containing protein -
  CVO91_RS03530 (CVO91_03530) - 649797..650558 (-) 762 WP_004298852.1 amino acid ABC transporter ATP-binding protein -
  CVO91_RS03535 (CVO91_03535) micA 650752..651456 (+) 705 WP_004298854.1 response regulator YycF Regulator
  CVO91_RS03540 (CVO91_03540) micB 651449..652798 (+) 1350 WP_004298856.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CVO91_RS03545 (CVO91_03545) vicX 652805..653608 (+) 804 WP_004298858.1 MBL fold metallo-hydrolase Regulator
  CVO91_RS03550 (CVO91_03550) vga(F) 653866..655251 (+) 1386 WP_004298859.1 ABC-F type ribosomal protection protein Vga(F) -
  CVO91_RS03555 (CVO91_03555) pbp2b 655343..657415 (+) 2073 WP_004298861.1 penicillin-binding protein PBP2B -
  CVO91_RS03560 (CVO91_03560) recR 657424..658020 (+) 597 WP_002935848.1 recombination mediator RecR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29543.64 Da        Isoelectric Point: 5.9824

>NTDB_id=256923 CVO91_RS03545 WP_004298858.1 652805..653608(+) (vicX) [Streptococcus suis strain CZ130302]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMAGIV
ANADAYLIESNHDVEILRAGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=256923 CVO91_RS03545 WP_004298858.1 652805..653608(+) (vicX) [Streptococcus suis strain CZ130302]
ATGATCGGAAAAGGATTTAACTACAGTATTTTGGCTTCGGGATCTAGTGGAAACTGTTTCTATTTGGAAACGGATAAGAA
GAAAATCTTGGTAGATGCTGGCCTATCAGGAAAAAAGATTACTAGCCTTTTGGCAGAAATTGACCGCAAGCCAGAAGATA
TTGATGCGATTTTAGTCACCCATGAGCATAGCGACCATATCCATGGTATCGGTGTTCTGGCACGTAAATATGGTATGGAT
ATTTATGCCAATGAGTTGACTTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGCGACCTAGACATTGAGTCATTTGGTGTCAGTCATGATGCGGCCTGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGATCGAATGGCTGGGATTGTG
GCGAATGCAGATGCCTATTTGATTGAGTCCAATCATGATGTCGAAATCTTGCGTGCGGGTTCTTATTCCTGGAATCTTAA
ACAACGGATTTTGTCGGATAAGGGGCACCTTTGTAATGAAGATGGAGCTGATGCCATGATTCGATCACTAGGAAATCGGA
CTAAAAAGATTTACCTTGGGCATTTATCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAGGTCTATGATACCTCGCCAGATACAGCGACGCCATTGACCAAGAT
TTGA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-156)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8N7Q9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.404

100

0.764

Multiple sequence alignment