Detailed information NTG0256662

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV724_RS05975
• Genome accession: NZ_CP024952
• Coordinates: 1228156..1228956 (-)
• Length: 266 a.a.
• NCBI ID: WP_145727267.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain B125A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1223156..1233956

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV724_RS05925 (CV724_05945)	-	1223892..1224071 (-)	180	WP_145727262.1	hypothetical protein	-
CV724_RS05930 (CV724_05950)	-	1224061..1224846 (-)	786	WP_145727263.1	hypothetical protein	-
CV724_RS05935 (CV724_05955)	-	1224846..1225227 (-)	382	Protein_1140	DUF1294 domain-containing protein	-
CV724_RS05945 (CV724_05965)	-	1225536..1225802 (-)	267	WP_108288949.1	lysozyme	-
CV724_RS05950 (CV724_05970)	-	1225790..1226164 (-)	375	WP_039093159.1	lysozyme	-
CV724_RS05955 (CV724_05975)	-	1226221..1226787 (-)	567	WP_145727264.1	hypothetical protein	-
CV724_RS05960 (CV724_05980)	-	1226771..1227076 (-)	306	WP_145727265.1	hypothetical protein	-
CV724_RS05965 (CV724_05985)	-	1227262..1227624 (-)	363	WP_108310617.1	tetratricopeptide repeat protein	-
CV724_RS05970 (CV724_05990)	dprB	1227755..1228159 (-)	405	WP_145727266.1	Holliday junction resolvase RuvX	Machinery gene
CV724_RS05975 (CV724_05995)	dprA	1228156..1228956 (-)	801	WP_145727267.1	DNA-processing protein DprA	Machinery gene
CV724_RS05980 (CV724_06000)	minE	1228968..1229201 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
CV724_RS05985 (CV724_06005)	minD	1229198..1230004 (-)	807	WP_023526244.1	septum site-determining protein MinD	-
CV724_RS05990 (CV724_06010)	ilvC	1230029..1231021 (-)	993	WP_145727268.1	ketol-acid reductoisomerase	-
CV724_RS06000 (CV724_06020)	-	1231270..1232052 (+)	783	WP_145727269.1	NAD+ synthase	-
CV724_RS06005 (CV724_06025)	-	1232049..1232987 (+)	939	WP_145727270.1	tetraacyldisaccharide 4'-kinase	-
CV724_RS06010 (CV724_06030)	pseH	1232920..1233462 (-)	543	WP_145727271.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29868.83 Da
• Isoelectric Point: 9.0812

>NTDB_id=256662 CV724_RS05975 WP_145727267.1 1228156..1228956(-) (dprA) [Helicobacter pylori strain B125A]
MKSNFQYSTLENIPKAFDILKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNHKVIQEIAQNGLILSEYEKDFMPVKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAKKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYFAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHLVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=256662 CV724_RS05975 WP_145727267.1 1228156..1228956(-) (dprA) [Helicobacter pylori strain B125A]
ATGAAAAGCAATTTCCAATACAGCACGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCACCTTTGAAAGTGGCTATCATTGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCGTTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTAAGAAATACCAAAAACCCTTATTTGTTTTACCCCAGCGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ATCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTTTGCGAAAAACCCGAGCTATGAAGAGGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAACTGTTGGGTAAGATCAAGCGCATCAATCATCTCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.23	84.962	0.41