Detailed information NTG0256627

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV726_RS05935
• Genome accession: NZ_CP024950
• Coordinates: 1213066..1213866 (-)
• Length: 266 a.a.
• NCBI ID: WP_145940502.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain B130A
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1208066..1218866

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV726_RS05905 (CV726_05895)	recJ	1208141..1209691 (+)	1551	WP_145940498.1	single-stranded-DNA-specific exonuclease RecJ	-
CV726_RS05910 (CV726_05900)	-	1209691..1210572 (+)	882	WP_145940499.1	RluA family pseudouridine synthase	-
CV726_RS05915 (CV726_05905)	-	1210683..1211243 (-)	561	WP_128030642.1	hypothetical protein	-
CV726_RS05920 (CV726_05910)	-	1211227..1211565 (-)	339	WP_145940500.1	hypothetical protein	-
CV726_RS05925 (CV726_05915)	-	1211694..1212389 (-)	696	WP_145940775.1	tetratricopeptide repeat protein	-
CV726_RS05930 (CV726_05920)	dprB	1212665..1213069 (-)	405	WP_145940501.1	Holliday junction resolvase RuvX	Machinery gene
CV726_RS05935 (CV726_05925)	dprA	1213066..1213866 (-)	801	WP_145940502.1	DNA-processing protein DprA	Machinery gene
CV726_RS05940 (CV726_05930)	minE	1213873..1214106 (-)	234	WP_000051425.1	cell division topological specificity factor MinE	-
CV726_RS05945 (CV726_05935)	minD	1214103..1214909 (-)	807	WP_003014933.1	septum site-determining protein MinD	-
CV726_RS05950 (CV726_05940)	ilvC	1214934..1215926 (-)	993	WP_145940503.1	ketol-acid reductoisomerase	-
CV726_RS05960 (CV726_05950)	-	1216175..1216957 (+)	783	WP_145940504.1	NAD+ synthase	-
CV726_RS05965 (CV726_05955)	-	1216954..1217892 (+)	939	WP_145940505.1	tetraacyldisaccharide 4'-kinase	-
CV726_RS05970 (CV726_05960)	pseH	1217825..1218367 (-)	543	WP_145940506.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29826.74 Da
• Isoelectric Point: 8.2264

>NTDB_id=256627 CV726_RS05935 WP_145940502.1 1213066..1213866(-) (dprA) [Helicobacter pylori strain B130A]
MKSHFQYSALENIPKAFGMLKDPPKKLYCVGDTKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=256627 CV726_RS05935 WP_145940502.1 1213066..1213866(-) (dprA) [Helicobacter pylori strain B130A]
ATGAAAAGCCATTTCCAATACAGCGCGCTAGAGAATATCCCTAAAGCCTTTGGCATGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATACCAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTGCCAAAAACGATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCTACGAA
CAATCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGTGCGAGATTAGCCCAAAAATACCAAAAGCCCTTATTTGTTTTACCCCAACGCCTGAATGAAAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGTGCCAAAAACCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATCAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	97.744	100	0.977
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414