Detailed information NTG0256560

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: CV729_RS02745
• Genome accession: NZ_CP024947
• Coordinates: 552659..553459 (+)
• Length: 266 a.a.
• NCBI ID: WP_194151366.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain J182
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 547659..558459

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CV729_RS02710 (CV729_02715)	pseH	548159..548701 (+)	543	WP_145732062.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-
CV729_RS02715 (CV729_02720)	-	548634..549572 (-)	939	WP_145732064.1	tetraacyldisaccharide 4'-kinase	-
CV729_RS02720 (CV729_02725)	-	549569..550351 (-)	783	WP_145732066.1	NAD+ synthase	-
CV729_RS02730 (CV729_02735)	ilvC	550600..551592 (+)	993	WP_145732068.1	ketol-acid reductoisomerase	-
CV729_RS02735 (CV729_02740)	minD	551611..552417 (+)	807	WP_023526244.1	septum site-determining protein MinD	-
CV729_RS02740 (CV729_02745)	minE	552414..552647 (+)	234	WP_000118278.1	cell division topological specificity factor MinE	-
CV729_RS02745 (CV729_02750)	dprA	552659..553459 (+)	801	WP_194151366.1	DNA-processing protein DprA	Machinery gene
CV729_RS02750 (CV729_02755)	dprB	553456..553860 (+)	405	WP_108281073.1	Holliday junction resolvase RuvX	Machinery gene
CV729_RS02755 (CV729_02760)	-	553992..554663 (+)	672	WP_145732071.1	tetratricopeptide repeat protein	-
CV729_RS02760 (CV729_02765)	-	554778..555083 (+)	306	WP_145732073.1	hypothetical protein	-
CV729_RS02765 (CV729_02770)	-	555067..555633 (+)	567	WP_145732075.1	hypothetical protein	-
CV729_RS02770 (CV729_02775)	-	555789..556670 (-)	882	WP_145732077.1	RluA family pseudouridine synthase	-
CV729_RS02775 (CV729_02780)	recJ	556670..558220 (-)	1551	WP_145732079.1	single-stranded-DNA-specific exonuclease RecJ	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29794.68 Da
• Isoelectric Point: 8.5826

>NTDB_id=256560 CV729_RS02745 WP_194151366.1 552659..553459(+) (dprA) [Helicobacter pylori strain J182]
MKSNFQYSALENIPKAFDILKNPPKKLYCVGDTKLLDAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDFIYPTNNHKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQHLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMKDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKVKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=256560 CV729_RS02745 WP_194151366.1 552659..553459(+) (dprA) [Helicobacter pylori strain J182]
ATGAAAAGCAATTTCCAATACAGCGCGCTAGAAAATATCCCTAAAGCCTTTGACATTCTCAAAAACCCCCCTAAAAAGCT
CTATTGTGTGGGCGATACCAAGCTTTTGGATGCACCTTTAAAAGTGGCGATCATCGGCACAAGAAGACCCACCCCTTACA
GCAAGCAACACACCATCACCCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGCGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTTATCTATCCCACGAA
CAACCATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCCAGAAACCGCCTGGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCCCAAAAATACCAAAAACCCTTATTTGTTTTGCCTCAGCACTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGAAAGATGAATTTTTAGAATATTGTGCCAAAAACCCAAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGGTTAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (12-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.992	100	0.97
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.611	81.203	0.395