Detailed information
Bioinformatically predicted
Overview
| Name | dprB | Type | Machinery gene |
| Locus tag | CV729_RS02750 | Genome accession | NZ_CP024947 |
| Coordinates | 553456..553860 (+) | Length | 134 a.a. |
| NCBI ID | WP_108281073.1 | Uniprot ID | - |
| Organism | Helicobacter pylori strain J182 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 548456..558860
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CV729_RS02715 (CV729_02720) | - | 548634..549572 (-) | 939 | WP_145732064.1 | tetraacyldisaccharide 4'-kinase | - |
| CV729_RS02720 (CV729_02725) | - | 549569..550351 (-) | 783 | WP_145732066.1 | NAD+ synthase | - |
| CV729_RS02730 (CV729_02735) | ilvC | 550600..551592 (+) | 993 | WP_145732068.1 | ketol-acid reductoisomerase | - |
| CV729_RS02735 (CV729_02740) | minD | 551611..552417 (+) | 807 | WP_023526244.1 | septum site-determining protein MinD | - |
| CV729_RS02740 (CV729_02745) | minE | 552414..552647 (+) | 234 | WP_000118278.1 | cell division topological specificity factor MinE | - |
| CV729_RS02745 (CV729_02750) | dprA | 552659..553459 (+) | 801 | WP_194151366.1 | DNA-processing protein DprA | Machinery gene |
| CV729_RS02750 (CV729_02755) | dprB | 553456..553860 (+) | 405 | WP_108281073.1 | Holliday junction resolvase RuvX | Machinery gene |
| CV729_RS02755 (CV729_02760) | - | 553992..554663 (+) | 672 | WP_145732071.1 | tetratricopeptide repeat protein | - |
| CV729_RS02760 (CV729_02765) | - | 554778..555083 (+) | 306 | WP_145732073.1 | hypothetical protein | - |
| CV729_RS02765 (CV729_02770) | - | 555067..555633 (+) | 567 | WP_145732075.1 | hypothetical protein | - |
| CV729_RS02770 (CV729_02775) | - | 555789..556670 (-) | 882 | WP_145732077.1 | RluA family pseudouridine synthase | - |
| CV729_RS02775 (CV729_02780) | recJ | 556670..558220 (-) | 1551 | WP_145732079.1 | single-stranded-DNA-specific exonuclease RecJ | - |
Sequence
Protein
Download Length: 134 a.a. Molecular weight: 15272.74 Da Isoelectric Point: 8.7023
>NTDB_id=256561 CV729_RS02750 WP_108281073.1 553456..553860(+) (dprB) [Helicobacter pylori strain J182]
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
MILACDVGLKRIGIAALLNGVILPLEAILRHNRNQASRDLSDLLREKNIQVLVVGKPNESYADTNARIEYFIKLLDFKGE
IVFINEDRSSIEAYENLEHLGKKNKRLAIKDGRLDSLSACRILERYCQQVLKNH
Nucleotide
Download Length: 405 bp
>NTDB_id=256561 CV729_RS02750 WP_108281073.1 553456..553860(+) (dprB) [Helicobacter pylori strain J182]
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATTGCTGCGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTGCGCCACAACAGGAACCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGCAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTGAAAAATC
ATTAG
GTGATTTTGGCATGCGATGTGGGGTTAAAACGCATTGGCATTGCTGCGCTTTTAAACGGCGTTATTTTACCTTTAGAAGC
GATTTTGCGCCACAACAGGAACCAGGCCTCTAGGGATTTGAGCGATTTATTGAGGGAAAAAAACATTCAGGTGCTAGTGG
TGGGCAAGCCTAATGAAAGCTATGCGGACACGAACGCGCGCATTGAATATTTCATCAAGCTTTTGGATTTTAAGGGCGAA
ATCGTTTTTATTAATGAAGACAGATCCAGCATAGAAGCCTATGAAAATTTAGAGCATTTGGGCAAGAAAAACAAGCGGCT
CGCTATCAAAGACGGCCGGCTAGACTCTTTGAGCGCTTGCAGGATCTTAGAGCGCTATTGCCAGCAGGTTTTGAAAAATC
ATTAG
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprB | Helicobacter pylori 26695 |
97.015 |
100 |
0.97 |