Detailed information
Bioinformatically predicted
Overview
| Name | pilG | Type | Regulator |
| Locus tag | SDE_RS18985 | Genome accession | NC_007912 |
| Coordinates | 4612404..4612799 (-) | Length | 131 a.a. |
| NCBI ID | WP_011470104.1 | Uniprot ID | Q21EJ0 |
| Organism | Saccharophagus degradans 2-40 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 4607404..4617799
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SDE_RS18965 (Sde_3630) | - | 4608179..4609027 (-) | 849 | WP_011470100.1 | CheR family methyltransferase | - |
| SDE_RS18970 (Sde_3631) | - | 4609052..4611247 (-) | 2196 | WP_011470101.1 | methyl-accepting chemotaxis protein | - |
| SDE_RS18975 (Sde_3632) | - | 4611398..4611937 (-) | 540 | WP_011470102.1 | chemotaxis protein CheW | - |
| SDE_RS18980 (Sde_3633) | pilH | 4611988..4612350 (-) | 363 | WP_011470103.1 | twitching motility response regulator PilH | - |
| SDE_RS18985 (Sde_3634) | pilG | 4612404..4612799 (-) | 396 | WP_011470104.1 | twitching motility response regulator PilG | Regulator |
| SDE_RS18990 (Sde_3635) | gshB | 4613090..4614013 (+) | 924 | WP_041324902.1 | glutathione synthase | - |
| SDE_RS18995 (Sde_3636) | - | 4614033..4614917 (+) | 885 | WP_011470106.1 | energy transducer TonB | - |
| SDE_RS19000 (Sde_3637) | - | 4615006..4615617 (+) | 612 | WP_011470107.1 | YqgE/AlgH family protein | - |
| SDE_RS19005 (Sde_3638) | ruvX | 4615675..4616103 (+) | 429 | WP_011470108.1 | Holliday junction resolvase RuvX | - |
| SDE_RS19010 (Sde_3639) | pilU | 4616127..4617269 (-) | 1143 | WP_011470109.1 | PilT/PilU family type 4a pilus ATPase | Machinery gene |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 14331.71 Da Isoelectric Point: 8.4980
>NTDB_id=25578 SDE_RS18985 WP_011470104.1 4612404..4612799(-) (pilG) [Saccharophagus degradans 2-40]
MDANLEHLKVMVIDDSKTIRRTAETLLKKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS
MDANLEHLKVMVIDDSKTIRRTAETLLKKVGCTVVTATDGFDALAKIADTRPDIIFVDIMMPRLDGYQTCALIKNNSEFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKGELIGAIEAHVKVARAS
Nucleotide
Download Length: 396 bp
>NTDB_id=25578 SDE_RS18985 WP_011470104.1 4612404..4612799(-) (pilG) [Saccharophagus degradans 2-40]
ATGGACGCGAATCTAGAACACCTAAAAGTGATGGTGATCGACGATAGTAAAACCATCCGCCGTACCGCCGAAACTTTGTT
AAAAAAAGTTGGCTGTACAGTAGTCACTGCCACAGATGGCTTTGACGCATTAGCAAAAATTGCTGATACTCGCCCAGATA
TTATTTTTGTGGACATTATGATGCCTCGCCTAGACGGATATCAAACTTGCGCACTCATCAAAAATAATAGCGAATTTAAA
TCTACCCCTGTCATCATGTTATCCAGCAAGGACGGCTTGTTCGACAAGGCCAAGGGGCGGATAGTTGGCTCAGATCAATA
CCTTACTAAGCCTTTTAGTAAAGGGGAATTGATCGGTGCAATTGAGGCGCATGTTAAGGTTGCTCGCGCGAGCTAA
ATGGACGCGAATCTAGAACACCTAAAAGTGATGGTGATCGACGATAGTAAAACCATCCGCCGTACCGCCGAAACTTTGTT
AAAAAAAGTTGGCTGTACAGTAGTCACTGCCACAGATGGCTTTGACGCATTAGCAAAAATTGCTGATACTCGCCCAGATA
TTATTTTTGTGGACATTATGATGCCTCGCCTAGACGGATATCAAACTTGCGCACTCATCAAAAATAATAGCGAATTTAAA
TCTACCCCTGTCATCATGTTATCCAGCAAGGACGGCTTGTTCGACAAGGCCAAGGGGCGGATAGTTGGCTCAGATCAATA
CCTTACTAAGCCTTTTAGTAAAGGGGAATTGATCGGTGCAATTGAGGCGCATGTTAAGGTTGCTCGCGCGAGCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilG | Acinetobacter baumannii strain A118 |
73.6 |
95.42 |
0.702 |
| vicR | Streptococcus mutans UA159 |
41.525 |
90.076 |
0.374 |