Detailed information NTG0254587

Bioinformatically predicted

Overview

• Name: comA/comEC
• Type: Machinery gene
• Locus tag: CS557_RS04840
• Genome accession: NZ_CP024632
• Coordinates: 1012529..1014943 (+)
• Length: 804 a.a.
• NCBI ID: WP_099948297.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain lzh-X15
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
Prophage	1011757..1019770	1012529..1014943	within	0

Gene organization within MGE regions

Location: 1011757..1019770

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CS557_RS04835 (CS557_04845)	lolD	1011757..1012443 (+)	687	WP_004913635.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
CS557_RS04840 (CS557_04850)	comA/comEC	1012529..1014943 (+)	2415	WP_099948297.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
CS557_RS04845 (CS557_04855)	-	1014951..1015931 (-)	981	WP_268876057.1	lysophospholipid acyltransferase family protein	-
CS557_RS04850 (CS557_04860)	sppA	1016034..1017056 (+)	1023	WP_004913625.1	signal peptide peptidase SppA	-
CS557_RS04855 (CS557_04865)	-	1017231..1018022 (+)	792	WP_099948299.1	alpha/beta fold hydrolase	-
CS557_RS04860 (CS557_04870)	purN	1018074..1018703 (-)	630	WP_171265933.1	phosphoribosylglycinamide formyltransferase	-
CS557_RS04865 (CS557_04875)	purM	1018700..1019770 (-)	1071	WP_099948301.1	phosphoribosylformylglycinamidine cyclo-ligase	-

Sequence

Protein

• Length: 804 a.a.
• Molecular weight: 92892.44 Da
• Isoelectric Point: 8.4753

>NTDB_id=254587 CS557_RS04840 WP_099948297.1 1012529..1014943(+) (comA/comEC) [Acinetobacter junii strain lzh-X15]
MLKIILIGWIVGISAMGRDFEIINSTWWIWCCIATLLFIFYKIKNKGHSPFYKSLLLITAIWAMFCAGYHYADLALEKRL
ELRELKSQPFEAVVYIRKINELTEEGVKQQAVVLNRHDQVVNWLMYIKEKDHQPEAFVLGRYYRVYGTIKPAHSYAVQGV
FDQEKWFLQQNLMSAFLVEQIVPLSQDEVYRLGHLQYLKEQNHFLEKIGLKIEIMRFEFRQMLAHSNLQHKGLLLALLTG
DESLLAKDLKKKFQQLGISHLLAISGPHVLIFAIMLTWGLQRVLQHYFPNLYLWQPRQIILVFPFLFSVMVYVAFVGFEI
PALRTLLTVALASFFVITRQAIQPFQLLIYSACLFLIYDPFSMLSAAFWLSYGACFILLRIYQTISTLPKDRIKNRTEDI
KFAIKILIESQWKIFIALMPLVIIFFQQIAWIAPLSNLIAIPILSMLVVPLDIFAACVWLIFPSLGLVLFTLNNMLLSIL
IRLLDVLMSLTPDLQGISYIPLSLFALSVGIFILFMPKGTIPKSWGLVCFLPILFGAKQQKTMLTILDVGQGQSVFLQQA
QHNLMIDTGGSYNEEKFSLGERVIVPFLRQQGIEKLDQMILSHLDQDHSGAFPYIEQVLEITKVYANEKNEKLPFKDNFS
FCHQGQKWNLEQAQVEILSPKIEELSYVQNQQNEYSCVVYIEFEHAKPYRKFLIMGDAGWETEYKLLQQYPDLEVDVIVL
GHHGSKHSSAYDFLATIKPKLAIASAGFENRYGHPSVELQQRLRTLNIPLLTTSQNGSISFEINHANTVISMYRQQRKWL
TRLQ

Nucleotide

• Length: 2415 bp

>NTDB_id=254587 CS557_RS04840 WP_099948297.1 1012529..1014943(+) (comA/comEC) [Acinetobacter junii strain lzh-X15]
ATGTTGAAAATTATATTGATTGGCTGGATTGTGGGTATTTCAGCTATGGGGCGTGATTTTGAAATCATTAATTCCACTTG
GTGGATTTGGTGCTGTATTGCGACTCTTCTATTTATTTTTTATAAAATAAAAAATAAAGGACATTCCCCATTTTATAAGT
CACTGTTATTGATCACTGCGATCTGGGCAATGTTTTGCGCAGGGTATCACTATGCAGATCTAGCTCTAGAAAAAAGACTT
GAATTACGCGAATTAAAATCGCAACCATTTGAGGCTGTTGTTTATATTCGAAAAATAAATGAACTCACTGAAGAGGGTGT
TAAACAGCAAGCTGTAGTTTTAAATCGACATGATCAAGTAGTGAATTGGTTGATGTACATAAAGGAGAAGGATCATCAGC
CAGAAGCTTTTGTATTGGGGCGCTATTATCGAGTTTACGGAACAATCAAACCCGCACACAGTTATGCCGTTCAAGGTGTT
TTTGATCAAGAAAAATGGTTCTTACAACAAAATTTAATGTCAGCATTTTTAGTCGAACAAATCGTACCTTTAAGCCAAGA
TGAGGTGTATAGGCTTGGTCATTTGCAATATTTGAAGGAGCAAAACCATTTTTTGGAGAAAATCGGTCTTAAGATTGAAA
TAATGCGATTTGAATTTAGGCAAATGCTTGCTCATTCAAATTTACAACACAAAGGATTGTTACTTGCGTTGCTTACAGGT
GATGAAAGTTTATTAGCTAAAGATTTAAAGAAAAAATTTCAGCAACTTGGGATTTCACATTTATTGGCGATCTCTGGTCC
TCATGTGCTGATTTTTGCAATCATGTTGACATGGGGATTGCAAAGAGTTTTACAGCATTATTTTCCAAACTTATATCTAT
GGCAACCTCGTCAGATTATTTTGGTTTTTCCATTTTTATTTAGTGTCATGGTTTACGTGGCTTTCGTTGGATTTGAAATT
CCAGCTTTAAGGACGTTGTTGACGGTCGCCTTGGCAAGTTTTTTCGTTATCACAAGGCAAGCGATTCAGCCTTTTCAGTT
ACTAATTTATAGCGCGTGTTTATTTCTCATCTATGATCCATTTAGTATGTTGTCGGCTGCCTTTTGGCTATCTTACGGTG
CATGTTTCATCCTATTGAGAATTTATCAAACGATCAGCACTCTACCAAAAGACAGAATAAAAAATAGAACTGAGGATATA
AAGTTTGCAATCAAAATTTTGATCGAATCACAATGGAAAATTTTTATTGCCTTAATGCCCTTAGTTATCATTTTTTTCCA
ACAAATTGCTTGGATTGCGCCACTCAGTAATCTGATAGCTATTCCGATATTAAGCATGTTGGTTGTACCTTTAGATATTT
TTGCTGCATGTGTTTGGCTAATTTTTCCTTCATTAGGTCTAGTTTTATTCACCCTCAATAATATGTTGTTAAGTATATTA
ATCAGATTATTAGATGTTTTGATGTCACTGACACCTGATTTACAAGGTATAAGTTATATCCCATTGTCGTTATTCGCTTT
GAGTGTCGGGATTTTTATTTTATTTATGCCGAAAGGAACGATACCTAAATCTTGGGGTTTAGTTTGTTTCTTACCTATTT
TATTCGGTGCAAAACAACAAAAGACTATGCTAACTATTTTAGATGTGGGGCAGGGACAATCTGTATTTTTACAACAAGCT
CAGCATAACCTAATGATAGATACTGGTGGTTCATATAATGAAGAGAAGTTCAGTTTAGGTGAGCGAGTGATTGTTCCATT
TCTTCGACAGCAGGGTATCGAAAAATTAGATCAAATGATTTTGTCACATCTTGATCAAGACCATAGTGGTGCTTTTCCAT
ATATTGAGCAAGTCCTCGAGATCACAAAGGTTTATGCAAATGAGAAAAATGAAAAACTGCCATTTAAAGATAATTTTTCT
TTTTGTCATCAAGGTCAAAAATGGAATTTAGAACAAGCTCAGGTTGAGATTCTATCTCCAAAAATAGAGGAGCTGAGTTA
TGTTCAAAATCAACAAAATGAATATTCATGTGTTGTGTATATTGAGTTTGAACATGCCAAACCATATCGCAAATTCTTAA
TTATGGGGGATGCAGGTTGGGAAACAGAATATAAGCTATTACAGCAATATCCAGACTTAGAGGTAGATGTCATTGTTTTG
GGGCATCATGGAAGCAAACATAGTTCAGCTTATGATTTTTTAGCAACAATTAAACCTAAATTGGCAATCGCTTCCGCAGG
TTTTGAAAATCGTTATGGTCATCCGAGTGTTGAATTACAGCAAAGATTGCGAACATTAAATATTCCATTGTTGACGACCA
GCCAAAACGGATCGATCTCCTTTGAAATCAATCATGCAAATACCGTAATTTCTATGTACAGACAACAACGTAAATGGTTA
ACTCGGTTGCAATAA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (237-514)

• Domain of unknown function (DUF4131) (DUF4131) (25-176)

• Metallo-beta-lactamase superfamily (Lactamase_B) (548-628)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA/comEC	Acinetobacter baumannii D1279779	53.144	100	0.536
comA/comEC	Acinetobacter baumannii strain A118	53.021	100	0.535
comA/comEC	Acinetobacter baylyi ADP1	49.32	100	0.496