Detailed information NTG0254453

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CTZ23_RS14070
• Genome accession: NZ_CP024620
• Coordinates: 2910060..2911415 (+)
• Length: 451 a.a.
• NCBI ID: WP_264757081.1
• Uniprot ID: -
• Organism: Acinetobacter indicus strain SGAir0564
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 2905060..2916415

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CTZ23_RS14050 (CTZ23_14110)	thrC	2905231..2906376 (+)	1146	WP_045796493.1	threonine synthase	-
CTZ23_RS14055 (CTZ23_14115)	-	2906470..2907552 (-)	1083	WP_125523564.1	serine hydrolase	-
CTZ23_RS14060 (CTZ23_14120)	-	2907770..2908405 (+)	636	WP_005181577.1	response regulator	-
CTZ23_RS14065 (CTZ23_14125)	pilS	2908420..2909988 (+)	1569	WP_087662535.1	sensor histidine kinase	Regulator
CTZ23_RS14070 (CTZ23_14130)	pilR	2910060..2911415 (+)	1356	WP_264757081.1	sigma-54-dependent transcriptional regulator	Regulator
CTZ23_RS14075 (CTZ23_14135)	-	2911432..2912601 (-)	1170	WP_087662537.1	S41 family peptidase	-
CTZ23_RS14080 (CTZ23_14140)	gpmI	2912625..2914172 (-)	1548	WP_087662538.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
CTZ23_RS14085 (CTZ23_14145)	lptG	2914291..2915361 (-)	1071	WP_045795380.1	LPS export ABC transporter permease LptG	-

Sequence

Protein

• Length: 451 a.a.
• Molecular weight: 50645.30 Da
• Isoelectric Point: 6.5620

>NTDB_id=254453 CTZ23_RS14070 WP_264757081.1 2910060..2911415(+) (pilR) [Acinetobacter indicus strain SGAir0564]
MQMTLARMGIQTHVAHRLEQARQLLSSHHYDACITDLNLPDGNGLQLVELIAQHFPQLPVAVLTAYGNMEIAIAALKAGA
FDFVSKPINQKHLEQLLEKALNQPLFKAHSQEADQLEQRMLIGQSLPIQQLRTTLKKIARSQAPVFISGESGTGKEVVAN
LVHRLSNRSDGPFIAINCGAIPSDLMESEFFGHKKGSFTGAAQDKQGLIQSAHGGSLFLDEIAELPLNMQVKLLRAVQEK
RIRPVGSDTEIDVDFRIISASHQDLEALVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILLLAQHFIQKIAQEWDIDSKT
LSERAQQFLLEQYYPGNVRELRNIIERAMTLSDDDVIDLPHLQTAPLRKMAPLAEPETDTATPVTADALPAAPRKLPEEG
LELFLEKIEKEILLNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDE

Nucleotide

• Length: 1356 bp

>NTDB_id=254453 CTZ23_RS14070 WP_264757081.1 2910060..2911415(+) (pilR) [Acinetobacter indicus strain SGAir0564]
ATGCAAATGACATTGGCGCGCATGGGGATTCAAACACACGTGGCACACCGGCTGGAGCAGGCACGGCAGTTGCTGTCCAG
TCATCATTATGACGCCTGCATCACTGATCTGAATTTACCTGATGGCAATGGCCTGCAACTGGTCGAGCTGATTGCCCAGC
ATTTTCCGCAGCTGCCGGTTGCGGTGCTGACGGCCTATGGCAATATGGAAATTGCCATTGCCGCGCTCAAAGCCGGGGCC
TTTGATTTTGTCAGCAAACCGATTAACCAGAAACACCTCGAACAATTGCTGGAAAAAGCACTGAATCAGCCGTTGTTTAA
AGCACATAGTCAGGAAGCGGACCAGCTGGAACAGCGGATGCTGATCGGGCAATCTCTGCCAATTCAGCAACTGCGCACCA
CCCTGAAAAAAATTGCCCGCTCGCAGGCACCGGTGTTTATTAGCGGTGAATCGGGCACCGGGAAAGAAGTGGTGGCCAAT
CTGGTGCATCGCCTCAGTAACCGCAGTGACGGGCCTTTTATTGCCATTAACTGTGGCGCCATTCCAAGCGATTTGATGGA
AAGCGAATTCTTCGGCCATAAAAAAGGCAGCTTTACCGGTGCAGCGCAGGACAAACAGGGCCTGATTCAGTCAGCACACG
GCGGTAGCCTGTTCTTGGATGAAATTGCCGAACTGCCGCTCAATATGCAGGTAAAACTGCTGCGCGCGGTGCAGGAAAAA
CGGATTCGTCCGGTCGGTTCCGATACGGAAATTGATGTTGATTTCCGGATTATCAGCGCCAGCCATCAGGACCTTGAAGC
GTTAGTCCAGCAAGGCCGGTTCCGTCAGGATCTGTTCTTCCGGATTCATGTGATGGATATTGTGCTGCCACCGCTACGTG
AGCGCGGTCAGGATATTTTATTGCTGGCCCAGCATTTTATTCAGAAAATTGCCCAGGAATGGGATATAGACAGCAAAACC
CTGTCAGAACGTGCCCAGCAGTTTTTGCTGGAACAGTATTATCCGGGTAATGTGCGTGAGCTGCGCAATATCATTGAACG
CGCCATGACTTTGAGTGATGATGATGTGATTGATCTGCCGCATCTGCAAACTGCACCGTTACGCAAGATGGCGCCGCTGG
CAGAACCAGAAACCGACACCGCAACGCCGGTTACAGCCGATGCCCTGCCCGCTGCTCCGCGTAAACTGCCGGAAGAAGGA
CTGGAGCTGTTTCTGGAGAAAATCGAAAAAGAGATTTTGCTGAATGCGCTGAATCTGACTCATTGGAACCGGACTTTGGC
TGCGAAAAAACTGGGGATGTCGTTTCGTTCCCTGCGTTATCGACTAAAGAAATTCGGGCTGGATACCGATGAATAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (404-445)

• Sigma-54 interaction domain (Sigma54_activat) (121-287)

• Response regulator receiver domain (Response_reg) (3-97)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.836	100	0.738
pilR	Pseudomonas aeruginosa PAK	50.557	99.557	0.503