Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   CTZ23_RS03965 Genome accession   NZ_CP024620
Coordinates   807342..807725 (+) Length   127 a.a.
NCBI ID   WP_045796318.1    Uniprot ID   -
Organism   Acinetobacter indicus strain SGAir0564     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 802342..812725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CTZ23_RS03955 (CTZ23_03965) - 805219..806364 (-) 1146 WP_045796316.1 efflux RND transporter periplasmic adaptor subunit -
  CTZ23_RS03960 (CTZ23_03970) - 806419..806970 (-) 552 WP_225876431.1 hypothetical protein -
  CTZ23_RS03965 (CTZ23_03975) pilG 807342..807725 (+) 384 WP_045796318.1 twitching motility response regulator PilG Regulator
  CTZ23_RS03970 (CTZ23_03980) - 807742..808110 (+) 369 WP_005179539.1 response regulator -
  CTZ23_RS03975 (CTZ23_03985) - 808114..808650 (+) 537 WP_005179538.1 chemotaxis protein CheW -
  CTZ23_RS03980 (CTZ23_03990) - 808696..810768 (+) 2073 WP_045796319.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14181.26 Da        Isoelectric Point: 4.8947

>NTDB_id=254429 CTZ23_RS03965 WP_045796318.1 807342..807725(+) (pilG) [Acinetobacter indicus strain SGAir0564]
MGDKLQNLKVMVIDDSKTIRRTAETLLQREGYEVVTAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLNAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=254429 CTZ23_RS03965 WP_045796318.1 807342..807725(+) (pilG) [Acinetobacter indicus strain SGAir0564]
ATGGGCGATAAACTCCAAAATCTAAAAGTCATGGTGATTGATGATTCAAAAACCATTCGTCGTACAGCTGAAACTTTATT
ACAGCGTGAGGGCTATGAAGTGGTCACTGCCGTCGACGGTTTTGAAGCATTGTCTAAAATTGCCGAGGCAAATCCGGATA
TCGTTTTTGTTGACATCATGATGCCACGTCTAGATGGCTATCAAACCTGCGCATTAATTAAAAACTCGCAAAACTACCAG
AATATTCCAGTCATCATGCTGTCCAGTAAAGATGGTCTGTTCGATCAGGCCAAAGGCCGCGTGGTGGGTTCAGATGAATA
TTTAACCAAACCTTTTAGTAAAGATGAGCTTTTAAACGCGATTCGTAATCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment