Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   CS873_RS05460 Genome accession   NZ_CP024610
Coordinates   1115727..1116995 (-) Length   422 a.a.
NCBI ID   WP_099974865.1    Uniprot ID   -
Organism   Lactobacillus terrae strain NIBRBAC000499792     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1110727..1121995
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CS873_RS05455 - 1114008..1115714 (-) 1707 WP_099974864.1 proline--tRNA ligase -
  CS873_RS05460 eeP 1115727..1116995 (-) 1269 WP_099974865.1 RIP metalloprotease RseP Regulator
  CS873_RS05465 - 1117013..1117807 (-) 795 WP_099974866.1 phosphatidate cytidylyltransferase -
  CS873_RS05470 - 1117822..1118556 (-) 735 WP_099974867.1 isoprenyl transferase -
  CS873_RS05475 frr 1118573..1119133 (-) 561 WP_099974868.1 ribosome recycling factor -
  CS873_RS05480 pyrH 1119136..1119864 (-) 729 WP_099974869.1 UMP kinase -
  CS873_RS05485 tsf 1119981..1120856 (-) 876 WP_099974870.1 translation elongation factor Ts -
  CS873_RS05490 rpsB 1121007..1121693 (-) 687 Protein_1097 30S ribosomal protein S2 -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46137.40 Da        Isoelectric Point: 7.4543

>NTDB_id=254226 CS873_RS05460 WP_099974865.1 1115727..1116995(-) (eeP) [Lactobacillus terrae strain NIBRBAC000499792]
MTAIITFIIVFGILVIVHEFGHYYAAKKSGILVREFSVGMGPKLVAYRRNSTTYTLRLLPLGGYVRMAGSQEDDSEIKPG
TMISLVLNDNEKVTKIIISSKIQEDNAIPVQVSKSDLVDDLVIEGFENGDESETKSYTVDHDATIIEQDGTEVQIAPRDV
QLQSASVWQRMITNFAGPLGNFILAILLFMLFAFMSGSVPSSSNQIGMVQKDSVAQKAGIKKNDKIIKVNGKTTNKWTDV
QNNIQDNPGKKITVQVKSGNKTENINLVPKSVSYNGDKYGMIGIGGSTDSGFGAKITYGFTHSWEVTSQIFHALKVMVTG
GFNLNQLSGPVGIYSMTAQASSNGLLYVISFMAMLSINLGIVNLIPIPALDGGKILLNIIEAIRRKPIPEEYENVITLVG
VAILVILMVSVTWNDIQRFFIK

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=254226 CS873_RS05460 WP_099974865.1 1115727..1116995(-) (eeP) [Lactobacillus terrae strain NIBRBAC000499792]
ATGACCGCAATAATTACTTTTATAATTGTATTTGGTATTTTAGTTATTGTTCATGAGTTTGGACATTACTATGCAGCCAA
GAAATCTGGAATTTTAGTCAGAGAATTTTCTGTTGGAATGGGTCCTAAGCTTGTTGCTTATCGCAGAAATAGCACTACAT
ATACTTTAAGACTATTGCCTTTGGGTGGATATGTCAGAATGGCTGGATCTCAAGAAGACGATTCTGAAATTAAACCAGGA
ACAATGATTTCTTTAGTTTTAAATGACAACGAAAAAGTTACTAAAATAATTATTTCTAGTAAAATTCAAGAAGATAATGC
TATACCAGTTCAAGTTTCTAAATCTGATTTAGTCGATGATTTAGTAATTGAAGGTTTTGAAAATGGTGATGAATCAGAGA
CAAAGAGTTATACTGTAGATCACGATGCAACTATTATTGAACAAGACGGAACAGAAGTTCAAATAGCACCTCGAGATGTA
CAACTTCAATCTGCTTCTGTTTGGCAAAGAATGATTACAAACTTTGCAGGACCACTAGGTAATTTTATTTTAGCGATTCT
TTTATTTATGCTATTTGCATTTATGTCAGGTAGTGTACCATCATCAAGTAATCAAATAGGTATGGTACAAAAGGATTCTG
TGGCTCAAAAGGCTGGAATTAAAAAGAATGATAAAATTATAAAAGTTAATGGTAAGACAACTAATAAGTGGACAGATGTT
CAGAATAATATTCAAGATAATCCTGGTAAGAAGATAACTGTTCAAGTTAAATCAGGAAATAAGACCGAAAATATCAATTT
AGTTCCTAAGTCCGTTTCTTATAATGGTGATAAATATGGAATGATTGGAATTGGTGGAAGTACTGATTCTGGATTTGGTG
CTAAAATAACTTACGGTTTCACTCACAGTTGGGAAGTTACAAGTCAAATATTCCATGCACTAAAGGTCATGGTCACTGGT
GGATTTAATCTTAACCAATTGTCAGGTCCAGTAGGTATCTATTCAATGACAGCACAAGCTTCATCAAACGGATTGCTTTA
TGTAATATCATTTATGGCTATGCTTTCAATCAATTTGGGAATTGTTAACTTGATTCCTATACCAGCTTTAGATGGTGGTA
AAATTTTGCTAAACATCATTGAAGCTATCAGACGTAAACCAATTCCAGAAGAATACGAAAATGTTATAACACTTGTTGGT
GTAGCTATTCTTGTTATTCTAATGGTTTCAGTTACATGGAATGATATTCAAAGGTTCTTTATTAAATAG

Domains

Predicted by InterproScan.

Peptidase family M50 (Peptidase_M50)

(6-407)

PDZ domain (PDZ_6)

(209-257)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

48.712

100

0.493
  eeP Streptococcus thermophilus LMD-9

48.712

100

0.493

Multiple sequence alignment