Detailed information NTG0253570

Bioinformatically predicted

Overview

• Name: ccpA
• Type: Regulator
• Locus tag: DKG78_RS14250
• Genome accession: NZ_CP029466
• Coordinates: 2914384..2915388 (-)
• Length: 334 a.a.
• NCBI ID: WP_003152385.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain HM618
• Function: regulate comCDE transcription and transformation (predicted from homology) Competence regulation

Genomic Context

Location: 2909384..2920388

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
DKG78_RS14225 (DKG78_14440)	-	2910347..2910979 (+)	633	WP_132105506.1	GNAT family N-acetyltransferase	-
DKG78_RS14230 (DKG78_14445)	-	2911004..2911648 (+)	645	WP_043021715.1	acetoin utilization AcuB family protein	-
DKG78_RS14235 (DKG78_14450)	-	2911645..2912811 (+)	1167	WP_007408773.1	acetoin utilization protein AcuC	-
DKG78_RS14240 (DKG78_14455)	motS	2912821..2913510 (-)	690	WP_003152387.1	flagellar motor protein MotS	-
DKG78_RS14245 (DKG78_14460)	motP	2913500..2914315 (-)	816	WP_007408775.1	flagellar motor protein MotP	-
DKG78_RS14250 (DKG78_14465)	ccpA	2914384..2915388 (-)	1005	WP_003152385.1	catabolite control protein A	Regulator
DKG78_RS14255 (DKG78_14470)	-	2915668..2916744 (-)	1077	WP_003152383.1	bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase	-
DKG78_RS14260 (DKG78_14475)	ytxJ	2916980..2917306 (-)	327	WP_023357089.1	bacillithiol system redox-active protein YtxJ	-
DKG78_RS14265 (DKG78_14480)	-	2917332..2917745 (-)	414	WP_003152380.1	YtxH domain-containing protein	-
DKG78_RS14270 (DKG78_14485)	-	2917778..2918200 (-)	423	WP_007408777.1	DUF948 domain-containing protein	-
DKG78_RS14275 (DKG78_14490)	murC	2918356..2919654 (-)	1299	WP_132105508.1	UDP-N-acetylmuramate--L-alanine ligase	-

Sequence

Protein

• Length: 334 a.a.
• Molecular weight: 36963.29 Da
• Isoelectric Point: 4.9206

>NTDB_id=253570 DKG78_RS14250 WP_003152385.1 2914384..2915388(-) (ccpA) [Bacillus amyloliquefaciens strain HM618]
MSNITIYDVAREANVSMATVSRVVNGNPNVKPTTRKKVLEAIDRLGYRPNAVARGLASKKTTTVGVIIPDISSIFYSELA
RGIEDIATMYKYNIILSNSDQNLEKELHLLNTMLGKQVDGIVFMGGNITDEHVEEFKRSPVPIVLAASVEEQGETPSVAI
DYEQAIYDAVKLFIDKGHRDIAFVSGPMQEPINRSKKLQGYKRALEEAAIPFNEQFVAEGDYTYDSGMEALQSLMGLDRK
PTAILSATDEMALGIIHAAQDQGLSIPDDLDIIGFDNTRLSLMVRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIV
ELPHRIELRQSTKS

Nucleotide

• Length: 1005 bp

>NTDB_id=253570 DKG78_RS14250 WP_003152385.1 2914384..2915388(-) (ccpA) [Bacillus amyloliquefaciens strain HM618]
GTGAGCAACATTACGATATACGATGTGGCCAGAGAAGCAAATGTCAGTATGGCGACTGTTTCCCGCGTCGTGAACGGCAA
CCCGAATGTAAAACCGACGACCAGAAAAAAAGTATTGGAAGCCATTGACCGGCTCGGCTATCGCCCGAACGCGGTGGCAA
GAGGGCTTGCAAGCAAAAAAACGACTACGGTCGGCGTCATCATCCCTGATATCTCAAGCATTTTCTACTCTGAACTTGCG
CGTGGAATTGAAGATATCGCGACGATGTACAAATATAATATTATTTTAAGCAACTCGGACCAAAATCTTGAGAAAGAACT
GCATCTGTTAAATACGATGCTCGGCAAACAAGTGGACGGTATCGTATTTATGGGCGGCAACATTACGGACGAGCATGTCG
AAGAATTTAAGCGCTCTCCTGTGCCGATCGTCTTGGCGGCATCAGTGGAAGAACAGGGCGAGACGCCTTCTGTCGCCATT
GATTATGAACAGGCGATTTATGATGCCGTTAAGCTTTTCATTGATAAAGGGCATCGCGATATTGCATTCGTCTCCGGACC
GATGCAAGAGCCGATCAACCGTTCGAAAAAACTGCAAGGGTACAAACGGGCGCTTGAAGAAGCGGCGATTCCGTTTAACG
AGCAATTCGTAGCGGAAGGCGATTACACCTATGATTCCGGTATGGAGGCGCTTCAAAGTTTGATGGGCCTTGACCGGAAA
CCGACGGCGATTCTTTCTGCGACGGATGAAATGGCCCTCGGCATTATCCATGCGGCCCAAGATCAAGGTCTTTCGATACC
TGATGATCTTGATATTATCGGTTTTGACAATACGAGATTGAGCCTGATGGTCCGCCCTCAGCTTTCAACAGTCGTGCAGC
CTACGTACGATATCGGCGCCGTGGCGATGAGACTTTTGACAAAACTGATGAACAAAGAGCCGGTTGAAGAGCATATCGTT
GAATTGCCTCACCGCATCGAATTAAGACAATCAACCAAGTCATAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (5-50)

• Periplasmic binding protein-like domain (Peripla_BP_3) (171-332)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccpA	Streptococcus pneumoniae D39	54.242	98.802	0.536
ccpA	Streptococcus gordonii str. Challis substr. CH1	53.333	98.802	0.527
ccpA	Lactococcus lactis subsp. lactis strain DGCC12653	50.602	99.401	0.503