Detailed information NTG0253491

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: A388_RS13400
• Genome accession: NZ_CP024418
• Coordinates: 2712110..2712802 (+)
• Length: 230 a.a.
• NCBI ID: WP_059262804.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain A388
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	2712809..2713819	2712110..2712802	flank	7

Gene organization within MGE regions

Location: 2712110..2713819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
A388_RS13400 (A388_02637)	crp	2712110..2712802 (+)	693	WP_059262804.1	cAMP-activated global transcriptional regulator CRP	Regulator
A388_RS13405 (A388_02638)	-	2712809..2713777 (-)	969	WP_012308653.1	IS30 family transposase	-

Sequence

Protein

• Length: 230 a.a.
• Molecular weight: 25919.59 Da
• Isoelectric Point: 5.0242

>NTDB_id=253491 A388_RS13400 WP_059262804.1 2712110..2712802(+) (crp) [Acinetobacter baumannii strain A388]
MTSNFSQLSTDALSTGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFDTSLEETPVTDED

Nucleotide

• Length: 693 bp

>NTDB_id=253491 A388_RS13400 WP_059262804.1 2712110..2712802(+) (crp) [Acinetobacter baumannii strain A388]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTACGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGTCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTGATACTTCATTAGAAGAAACCCCAGTCACTGACGAAGACTAG

Domains

Predicted by InterproScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

• Crp-like helix-turn-helix domain (HTH_Crp_2) (152-218)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	99.565	100	0.996
crp	Vibrio cholerae strain A1552	47.343	90	0.426
crp	Haemophilus influenzae Rd KW20	48.705	83.913	0.409