Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | A388_RS02030 | Genome accession | NZ_CP024418 |
| Coordinates | 398478..398960 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046489.1 | Uniprot ID | A0A0J0ZLV7 |
| Organism | Acinetobacter baumannii strain A388 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 393478..403960
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| A388_RS02020 (A388_00376) | pilX | 393783..394601 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| A388_RS02025 (A388_00377) | pilY1 | 394613..398467 (+) | 3855 | WP_000768943.1 | vWA domain-containing protein | Machinery gene |
| A388_RS02030 (A388_00378) | pilY2 | 398478..398960 (+) | 483 | WP_001046489.1 | type IV pilin protein | Machinery gene |
| A388_RS02035 (A388_00379) | pilE | 398957..399382 (+) | 426 | WP_000788336.1 | type IV pilin protein | Machinery gene |
| A388_RS02040 (A388_00380) | rpsP | 399529..399780 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| A388_RS02045 (A388_00381) | rimM | 399800..400348 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| A388_RS02050 (A388_00382) | trmD | 400394..401134 (+) | 741 | WP_000464595.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| A388_RS02055 (A388_00383) | rplS | 401342..401710 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| A388_RS02060 (A388_00384) | - | 401762..402703 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| A388_RS02065 (A388_00385) | - | 402818..403849 (-) | 1032 | WP_001189459.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17657.94 Da Isoelectric Point: 8.4737
>NTDB_id=253476 A388_RS02030 WP_001046489.1 398478..398960(+) (pilY2) [Acinetobacter baumannii strain A388]
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
MNKYYILRFNQGFTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGIRCQSLTVTAVDNDCGGTTTCNTCETNSEVWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=253476 A388_RS02030 WP_001046489.1 398478..398960(+) (pilY2) [Acinetobacter baumannii strain A388]
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
ATGAATAAGTACTACATTTTACGGTTCAATCAGGGTTTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGAAATTTATTGACGAATGCTGCTGCAAATGGGCAAAC
ATGGGTCATTAAAGCAACCACAACAGATTCGAGAAATTTTAATTTTATTGCTAAAAATTCAGGTATACGTTGTCAAAGTT
TAACAGTTACAGCCGTTGATAATGATTGTGGTGGTACGACTACTTGTAATACATGTGAAACGAACAGTGAGGTTTGGCAG
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
96.25 |
100 |
0.963 |
| comE | Acinetobacter baylyi ADP1 |
41.86 |
100 |
0.45 |