Detailed information NTG0252996

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: CSE15_RS16965
• Genome accession: NZ_CP024204
• Coordinates: 3235824..3236999 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus altitudinis strain P-10
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3230824..3241999

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSE15_RS16935 (CSE15_17005)	-	3231000..3231419 (-)	420	WP_017357864.1	TIGR03826 family flagellar region protein	-
CSE15_RS16940 (CSE15_17010)	comFC	3231476..3232162 (-)	687	WP_182488940.1	ComF family protein	Machinery gene
CSE15_RS16945 (CSE15_17015)	-	3232159..3232452 (-)	294	WP_099496873.1	late competence development ComFB family protein	-
CSE15_RS16950 (CSE15_17020)	comFA	3232517..3233896 (-)	1380	WP_157774431.1	DEAD/DEAH box helicase	Machinery gene
CSE15_RS16955 (CSE15_17025)	-	3234016..3234858 (-)	843	WP_007499966.1	DegV family protein	-
CSE15_RS16960 (CSE15_17030)	degU	3235070..3235759 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
CSE15_RS16965 (CSE15_17035)	degS	3235824..3236999 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
CSE15_RS16970 (CSE15_17040)	-	3237221..3237889 (+)	669	WP_017357860.1	YigZ family protein	-
CSE15_RS16975 (CSE15_17045)	-	3237874..3238971 (+)	1098	WP_007499958.1	LCP family protein	-
CSE15_RS16980 (CSE15_17050)	-	3239009..3240076 (-)	1068	WP_007499956.1	glycosyltransferase family 4 protein	-
CSE15_RS16985 (CSE15_17055)	tuaH	3240211..3241458 (-)	1248	WP_099496874.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=252996 CSE15_RS16965 WP_003213166.1 3235824..3236999(-) (degS) [Bacillus altitudinis strain P-10]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=252996 CSE15_RS16965 WP_003213166.1 3235824..3236999(-) (degS) [Bacillus altitudinis strain P-10]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATTAAACAGCAAG
TCAACGAAGTCATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGATGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAGGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAACTAATAGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTGCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCTTAGGTGATACTGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAATTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTCACCTTAATAATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCTTTTGGGTTACTTGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841