Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   CSE15_RS05715 Genome accession   NZ_CP024204
Coordinates   1121301..1121498 (+) Length   65 a.a.
NCBI ID   WP_017367008.1    Uniprot ID   -
Organism   Bacillus altitudinis strain P-10     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1116301..1126498
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSE15_RS05685 (CSE15_05705) - 1116701..1116880 (+) 180 WP_008348517.1 YjzC family protein -
  CSE15_RS05690 (CSE15_05710) - 1117050..1118315 (+) 1266 WP_007499050.1 MFS transporter -
  CSE15_RS05695 (CSE15_05715) - 1118435..1118629 (-) 195 WP_008348514.1 YjzD family protein -
  CSE15_RS05700 (CSE15_05720) - 1118842..1119582 (+) 741 WP_007499048.1 hypothetical protein -
  CSE15_RS05705 (CSE15_05725) - 1119658..1120233 (+) 576 WP_017360175.1 hypothetical protein -
  CSE15_RS05710 (CSE15_05730) med 1120324..1121289 (+) 966 WP_008348509.1 BMP family ABC transporter substrate-binding protein Regulator
  CSE15_RS05715 (CSE15_05735) comZ 1121301..1121498 (+) 198 WP_017367008.1 ComZ family protein Regulator
  CSE15_RS05720 (CSE15_05740) - 1121509..1121742 (-) 234 WP_008348506.1 hypothetical protein -
  CSE15_RS05725 (CSE15_05745) - 1121912..1122850 (+) 939 WP_008348504.1 beta-ketoacyl-ACP synthase III -
  CSE15_RS05730 (CSE15_05750) fabF 1122872..1124113 (+) 1242 WP_008348501.1 beta-ketoacyl-ACP synthase II -
  CSE15_RS05735 (CSE15_05755) - 1124191..1124985 (+) 795 WP_017367009.1 DUF2268 domain-containing protein -
  CSE15_RS05740 (CSE15_05760) - 1125156..1126136 (+) 981 WP_017367010.1 ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 65 a.a.        Molecular weight: 7346.42 Da        Isoelectric Point: 4.3178

>NTDB_id=252956 CSE15_RS05715 WP_017367008.1 1121301..1121498(+) (comZ) [Bacillus altitudinis strain P-10]
MQHEKSMEFLQIAMKYFPQAKEELDKAGIQLDPQVLQPLLSLFTSVMQEAYELGKADAASEKATE

Nucleotide


Download         Length: 198 bp        

>NTDB_id=252956 CSE15_RS05715 WP_017367008.1 1121301..1121498(+) (comZ) [Bacillus altitudinis strain P-10]
ATGCAGCACGAAAAATCGATGGAGTTTTTACAAATTGCGATGAAGTATTTTCCACAAGCAAAAGAAGAATTAGATAAAGC
AGGGATTCAGCTTGATCCACAAGTACTTCAGCCGCTTCTCTCTTTGTTTACATCTGTCATGCAAGAGGCATATGAGCTTG
GAAAAGCAGATGCAGCATCAGAAAAAGCCACAGAATAG

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

68.852

93.846

0.646

Multiple sequence alignment