Detailed information    

insolico Bioinformatically predicted

Overview

Name   nucA/comI   Type   Machinery gene
Locus tag   CSE15_RS02050 Genome accession   NZ_CP024204
Coordinates   376411..376839 (-) Length   142 a.a.
NCBI ID   WP_007498233.1    Uniprot ID   A0AAU7FLT6
Organism   Bacillus altitudinis strain P-10     
Function   cleavage of dsDNA into ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 371411..381839
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSE15_RS02020 (CSE15_02025) - 371555..371884 (+) 330 WP_007498247.1 YckD family protein -
  CSE15_RS02025 (CSE15_02030) - 371931..372695 (-) 765 WP_039963201.1 MBL fold metallo-hydrolase -
  CSE15_RS02030 (CSE15_02035) - 372811..373230 (+) 420 WP_039963300.1 Lrp/AsnC family transcriptional regulator -
  CSE15_RS02035 (CSE15_02040) - 373255..374061 (+) 807 WP_099496295.1 aminoglycoside N(3)-acetyltransferase -
  CSE15_RS02040 (CSE15_02045) comJ 374063..374449 (-) 387 WP_099496296.1 competence protein ComJ -
  CSE15_RS02045 (CSE15_02050) - 374587..376284 (-) 1698 WP_099496297.1 methyl-accepting chemotaxis protein -
  CSE15_RS02050 (CSE15_02055) nucA/comI 376411..376839 (-) 429 WP_007498233.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  CSE15_RS02060 (CSE15_02065) - 377206..379275 (+) 2070 WP_099496298.1 hydantoinase/oxoprolinase family protein -
  CSE15_RS02065 (CSE15_02070) - 379265..381250 (+) 1986 WP_017366593.1 hydantoinase B/oxoprolinase family protein -

Sequence

Protein


Download         Length: 142 a.a.        Molecular weight: 15926.90 Da        Isoelectric Point: 6.4881

>NTDB_id=252947 CSE15_RS02050 WP_007498233.1 376411..376839(-) (nucA/comI) [Bacillus altitudinis strain P-10]
MKLLKTILLLLLIVIGIATGYVQLGQHKQETTNSSYDKTIHFPSDRYPETAKHIEEAIDEGHSSICTIDRKNSDEQRDKS
LHGIPTKRGYDRDEWPMAMCKEGGAGASVKYVRPSDNRGAGSWVSHQLSDDPDGTRIQFIIE

Nucleotide


Download         Length: 429 bp        

>NTDB_id=252947 CSE15_RS02050 WP_007498233.1 376411..376839(-) (nucA/comI) [Bacillus altitudinis strain P-10]
ATGAAACTTCTTAAAACCATTCTCTTGCTTTTATTGATTGTCATTGGTATAGCGACAGGCTATGTCCAACTAGGGCAACA
TAAACAAGAGACGACAAACTCTTCTTATGACAAAACCATTCACTTTCCATCAGATCGATATCCAGAAACCGCGAAGCACA
TAGAAGAAGCTATTGACGAAGGTCATTCTTCCATTTGCACCATTGATCGAAAAAATAGTGATGAGCAAAGAGACAAATCA
CTTCATGGCATTCCAACAAAGCGTGGTTATGATCGTGATGAATGGCCAATGGCGATGTGTAAAGAAGGTGGAGCAGGGGC
TTCTGTCAAATATGTACGTCCTTCGGATAATAGGGGGGCAGGCTCTTGGGTAAGTCATCAATTATCAGATGATCCTGATG
GCACAAGAATCCAATTTATTATCGAGTAG

Domains

Predicted by InterproScan.

Deoxyribonuclease NucA/NucB (DNase_NucA_NucB)

(46-136)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nucA/comI Bacillus subtilis subsp. subtilis str. 168

68.224

75.352

0.514

Multiple sequence alignment