Detailed information
Bioinformatically predicted
Overview
| Name | comX/sigX | Type | Regulator |
| Locus tag | CR542_RS00425 | Genome accession | NZ_CP024126 |
| Coordinates | 72274..72540 (+) | Length | 88 a.a. |
| NCBI ID | WP_002939335.1 | Uniprot ID | A0A126UJ45 |
| Organism | Streptococcus suis strain HA0609 | ||
| Function | activate transcription of late competence genes (predicted from homology) Competence regulation |
||
Genomic Context
Location: 67274..77540
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CR542_RS00395 (CR542_00395) | recA | 68463..69614 (+) | 1152 | WP_011922545.1 | recombinase RecA | Machinery gene |
| CR542_RS00400 (CR542_00400) | spx | 69850..70248 (+) | 399 | WP_002939362.1 | transcriptional regulator Spx | - |
| CR542_RS00405 (CR542_00405) | - | 70348..70614 (+) | 267 | WP_002939360.1 | IreB family regulatory phosphoprotein | - |
| CR542_RS00410 (CR542_00410) | ruvX | 70614..71033 (+) | 420 | WP_002939356.1 | Holliday junction resolvase RuvX | - |
| CR542_RS00415 (CR542_00415) | - | 71045..71365 (+) | 321 | WP_002939343.1 | DUF1292 domain-containing protein | - |
| CR542_RS00420 (CR542_00420) | - | 71623..72201 (+) | 579 | WP_044667815.1 | nucleotidyltransferase family protein | - |
| CR542_RS00425 (CR542_00425) | comX/sigX | 72274..72540 (+) | 267 | WP_002939335.1 | hypothetical protein | Regulator |
| CR542_RS00430 (CR542_00430) | rpsJ | 72862..73170 (+) | 309 | WP_013730061.1 | 30S ribosomal protein S10 | - |
| CR542_RS00435 (CR542_00435) | rplC | 73383..74009 (+) | 627 | WP_011921686.1 | 50S ribosomal protein L3 | - |
| CR542_RS00440 (CR542_00440) | rplD | 74034..74657 (+) | 624 | WP_004195490.1 | 50S ribosomal protein L4 | - |
| CR542_RS00445 (CR542_00445) | - | 74657..74956 (+) | 300 | WP_004195491.1 | 50S ribosomal protein L23 | - |
| CR542_RS00450 (CR542_00450) | rplB | 74974..75807 (+) | 834 | WP_002936663.1 | 50S ribosomal protein L2 | - |
| CR542_RS00455 (CR542_00455) | rpsS | 75909..76190 (+) | 282 | WP_000533766.1 | 30S ribosomal protein S19 | - |
| CR542_RS00460 (CR542_00460) | rplV | 76208..76552 (+) | 345 | WP_002936662.1 | 50S ribosomal protein L22 | - |
| CR542_RS00465 (CR542_00465) | rpsC | 76565..77218 (+) | 654 | WP_002936661.1 | 30S ribosomal protein S3 | - |
Sequence
Protein
Download Length: 88 a.a. Molecular weight: 10717.52 Da Isoelectric Point: 9.1949
>NTDB_id=252365 CR542_RS00425 WP_002939335.1 72274..72540(+) (comX/sigX) [Streptococcus suis strain HA0609]
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
MEFETVCLKVRNLGRLYCYFKVKFRNHIEAIIRKQESQKCKFDRLFHEDIHSLIQSPSLGNDELLMLWGLLRDYRKNLIN
DRLENMKN
Nucleotide
Download Length: 267 bp
>NTDB_id=252365 CR542_RS00425 WP_002939335.1 72274..72540(+) (comX/sigX) [Streptococcus suis strain HA0609]
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
ATGGAATTTGAAACGGTTTGTTTGAAGGTTAGAAACTTAGGTAGGCTATATTGCTACTTCAAAGTTAAATTTAGAAACCA
TATCGAGGCTATAATTCGTAAACAGGAAAGTCAAAAATGTAAATTTGATCGTCTCTTCCATGAAGATATTCATAGTTTGA
TTCAATCACCGAGCTTGGGTAATGATGAGTTGCTGATGTTATGGGGTCTCCTGAGAGATTATCGAAAAAATTTAATCAAT
GACCGACTTGAAAATATGAAAAATTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comX/sigX | Streptococcus suis D9 |
73.973 |
82.955 |
0.614 |
| comX/sigX | Streptococcus suis isolate S10 |
72.603 |
82.955 |
0.602 |
| comX/sigX | Streptococcus suis P1/7 |
72.603 |
82.955 |
0.602 |
| comX/sigX/comX1/sigX1 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |
| comX/sigX/comX2/sigX2 | Streptococcus mitis NCTC 12261 |
39.506 |
92.045 |
0.364 |