Detailed information
Bioinformatically predicted
Overview
| Name | sinR | Type | Regulator |
| Locus tag | CG477_RS06050 | Genome accession | NZ_CP024113 |
| Coordinates | 1175379..1175702 (-) | Length | 107 a.a. |
| NCBI ID | WP_011984082.1 | Uniprot ID | A7GMH1 |
| Organism | Bacillus cytotoxicus strain CH_3 | ||
| Function | repression of rok; repression of degU; repression of spo0A (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1170379..1180702
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CG477_RS06020 (CG477_006035) | - | 1170720..1170927 (+) | 208 | Protein_1084 | hypothetical protein | - |
| CG477_RS06025 (CG477_006040) | - | 1171085..1172356 (+) | 1272 | WP_011984077.1 | D-alanyl-D-alanine carboxypeptidase family protein | - |
| CG477_RS06030 (CG477_006045) | sipW | 1172488..1173063 (+) | 576 | WP_011984078.1 | signal peptidase I SipW | - |
| CG477_RS06035 (CG477_006050) | - | 1173109..1173699 (+) | 591 | WP_011984079.1 | TasA family protein | - |
| CG477_RS06040 (CG477_006055) | - | 1173790..1174476 (+) | 687 | WP_011984080.1 | DUF4047 domain-containing protein | - |
| CG477_RS06045 (CG477_006060) | calY | 1174707..1175300 (+) | 594 | WP_011984081.1 | biofilm matrix protein CalY | - |
| CG477_RS06050 (CG477_006065) | sinR | 1175379..1175702 (-) | 324 | WP_011984082.1 | helix-turn-helix domain-containing protein | Regulator |
| CG477_RS06055 (CG477_006070) | - | 1175780..1175911 (-) | 132 | WP_011984083.1 | anti-repressor SinI family protein | - |
| CG477_RS06060 (CG477_006075) | - | 1176273..1178660 (+) | 2388 | WP_011984084.1 | immune inhibitor A domain-containing protein | - |
| CG477_RS06065 (CG477_006080) | - | 1178867..1180231 (+) | 1365 | WP_011984085.1 | aldehyde dehydrogenase | - |
Sequence
Protein
Download Length: 107 a.a. Molecular weight: 12380.21 Da Isoelectric Point: 8.6049
>NTDB_id=252153 CG477_RS06050 WP_011984082.1 1175379..1175702(-) (sinR) [Bacillus cytotoxicus strain CH_3]
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
MIGERIKRLRLQRGISLTELAEKAGVAKSYISSIERNLQQNPSIQFLEKIAAVLQIPIDTLLHDTTPLENQLDSEWTHLV
KEAMNSGVSKEQFREFIEFSKWKQNQK
Nucleotide
Download Length: 324 bp
>NTDB_id=252153 CG477_RS06050 WP_011984082.1 1175379..1175702(-) (sinR) [Bacillus cytotoxicus strain CH_3]
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
ATGATTGGAGAACGTATAAAACGCCTTCGCTTACAAAGAGGGATTTCTTTAACAGAACTTGCTGAAAAGGCCGGTGTTGC
AAAGTCCTACATTAGCTCCATTGAACGTAATTTACAACAAAATCCGTCCATTCAATTTTTAGAAAAAATCGCAGCCGTTC
TGCAAATACCAATTGACACACTTCTTCATGACACAACACCGTTAGAAAATCAATTAGACTCTGAATGGACACACCTTGTT
AAAGAAGCAATGAACTCTGGTGTCTCAAAAGAACAATTCCGTGAATTCATTGAGTTTAGTAAATGGAAACAAAATCAAAA
ATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sinR | Bacillus subtilis subsp. subtilis str. 168 |
64.22 |
100 |
0.654 |