Detailed information NTG0251965

Bioinformatically predicted

Overview

• Name: scnR
• Type: Regulator
• Locus tag: CG481_RS10265
• Genome accession: NZ_CP024104
• Coordinates: 1981226..1981939 (+)
• Length: 237 a.a.
• NCBI ID: WP_048722965.1
• Uniprot ID: A0AAX2CGP3
• Organism: Bacillus cytotoxicus strain CH_23
• Function: regulate comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 1976226..1986939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CG481_RS23595	-	1976322..1976456 (+)	135	WP_235436365.1	NmrA family NAD(P)-binding protein	-
CG481_RS23600	-	1976444..1976827 (+)	384	WP_235436366.1	NAD(P)H-binding protein	-
CG481_RS10240 (CG481_010150)	-	1977226..1978038 (+)	813	WP_012094306.1	MerR family transcriptional regulator	-
CG481_RS10245 (CG481_010155)	-	1978383..1979300 (+)	918	WP_048723104.1	ABC transporter ATP-binding protein	-
CG481_RS10250 (CG481_010160)	-	1979297..1980049 (+)	753	WP_048722961.1	ABC transporter permease	-
CG481_RS10255 (CG481_010165)	-	1980062..1980793 (+)	732	WP_048722963.1	ABC transporter permease	-
CG481_RS23605	-	1980922..1981125 (+)	204	WP_235436391.1	DUF1093 domain-containing protein	-
CG481_RS10265 (CG481_010175)	scnR	1981226..1981939 (+)	714	WP_048722965.1	response regulator transcription factor	Regulator
CG481_RS10270 (CG481_010180)	-	1981940..1983346 (+)	1407	WP_048722967.1	sensor histidine kinase	-
CG481_RS10275 (CG481_010185)	-	1983703..1984041 (-)	339	WP_048722970.1	DUF4064 domain-containing protein	-
CG481_RS10280 (CG481_010190)	-	1984058..1984504 (-)	447	Protein_1925	DUF4352 domain-containing protein	-
CG481_RS22820	-	1984491..1984799 (+)	309	WP_140388422.1	hypothetical protein	-
CG481_RS10285 (CG481_010195)	abrB	1985224..1985502 (+)	279	WP_012094321.1	AbrB/MazE/SpoVT family DNA-binding domain-containing protein	Regulator
CG481_RS10290 (CG481_010200)	-	1985721..1986515 (+)	795	WP_048722974.1	LysM peptidoglycan-binding domain-containing protein	-
CG481_RS10295 (CG481_010205)	-	1986723..1986920 (+)	198	WP_048722977.1	hypothetical protein	-

Sequence

Protein

• Length: 237 a.a.
• Molecular weight: 26942.45 Da
• Isoelectric Point: 6.2727

>NTDB_id=251965 CG481_RS10265 WP_048722965.1 1981226..1981939(+) (scnR) [Bacillus cytotoxicus strain CH_23]
MGNLKDKKILIVDDEPEIRIMIERFLRKEGFFRIFSAADCTSALSLCRVDRPDIVILDVMLPDGDGFSLLSSIRQFSNMP
VLFLSARGEDEDRLLGLGLGADDYIVKPFLPRELVLRLIAVLKRVYSSPVVERLSIFQLGKQTVDLESAVVYRGETEMPL
TAKEHAILVKLYENRGRIVTSDAICQAVWGDDSYGYENTLMVHIRRVREKIEPDPSKPIYLLTVRGLGYKLLLKETH

Nucleotide

• Length: 714 bp

>NTDB_id=251965 CG481_RS10265 WP_048722965.1 1981226..1981939(+) (scnR) [Bacillus cytotoxicus strain CH_23]
ATGGGAAATTTAAAAGATAAAAAAATCTTAATTGTCGATGATGAACCAGAAATAAGAATCATGATTGAAAGGTTCTTAAG
AAAAGAGGGATTTTTCCGGATTTTTAGTGCTGCTGATTGTACGTCAGCTCTATCGCTTTGTCGTGTAGATCGGCCAGATA
TCGTTATTCTTGATGTTATGCTACCTGATGGTGACGGCTTTTCACTTTTATCTTCGATTAGGCAGTTCTCAAATATGCCG
GTTCTGTTTCTATCTGCACGAGGAGAAGATGAGGACCGGTTACTTGGATTAGGTTTAGGGGCAGATGATTATATTGTAAA
GCCGTTCTTACCACGTGAACTCGTATTACGTCTTATCGCTGTTTTAAAACGAGTCTATTCTTCTCCTGTTGTAGAGCGTC
TATCAATCTTTCAATTAGGGAAACAAACTGTGGACTTAGAAAGCGCTGTTGTGTATAGGGGTGAAACAGAAATGCCCTTA
ACAGCAAAAGAACATGCTATTCTTGTAAAGCTATATGAGAATCGAGGTCGAATTGTGACAAGCGACGCTATATGTCAAGC
AGTTTGGGGAGATGATAGCTACGGTTACGAAAATACATTAATGGTCCATATTAGGCGAGTACGTGAAAAAATTGAACCAG
ATCCCTCCAAACCGATTTATCTTCTTACTGTGAGGGGACTAGGGTATAAATTGCTTTTGAAGGAGACGCATTAA

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (156-231)

• Response regulator receiver domain (Response_reg) (9-117)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
scnR	Streptococcus mutans UA159	49.782	96.624	0.481
vicR	Streptococcus mutans UA159	40.611	96.624	0.392
micA	Streptococcus pneumoniae Cp1015	40.351	96.203	0.388