Detailed information NTG0251290

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: CRN81_RS00285
• Genome accession: NZ_CP024028
• Coordinates: 73051..74364 (-)
• Length: 437 a.a.
• NCBI ID: WP_099426218.1
• Uniprot ID: -
• Organism: Chromobacterium violaceum strain CV1192
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 68051..79364

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CRN81_RS00275 (CRN81_00270)	-	69569..70819 (-)	1251	WP_099426216.1	HlyD family secretion protein	-
CRN81_RS20530	-	71335..71511 (+)	177	WP_157760154.1	hypothetical protein	-
CRN81_RS00280 (CRN81_00275)	-	71614..72999 (+)	1386	WP_198403988.1	radical SAM/SPASM domain-containing protein	-
CRN81_RS00285 (CRN81_00280)	pilR	73051..74364 (-)	1314	WP_099426218.1	sigma-54-dependent transcriptional regulator	Regulator
CRN81_RS00290 (CRN81_00285)	-	74357..75913 (-)	1557	WP_045051037.1	two-component system sensor histidine kinase NtrB	-
CRN81_RS00295 (CRN81_00290)	parC	75913..78264 (-)	2352	WP_045051038.1	DNA topoisomerase IV subunit A	-
CRN81_RS00300 (CRN81_00295)	-	78363..78899 (+)	537	WP_232514908.1	GNAT family N-acetyltransferase	-

Sequence

Protein

• Length: 437 a.a.
• Molecular weight: 47759.77 Da
• Isoelectric Point: 5.6281

>NTDB_id=251290 CRN81_RS00285 WP_099426218.1 73051..74364(-) (pilR) [Chromobacterium violaceum strain CV1192]
MTKTLRVLIVDDEPDIRELLELTLLKMGLAPVCAGSVAEARSALDAGGFDLALTDMRLPDGEGLEVVNHIGESGLDVPIA
VITAYGSADNAVRAMKAGAFDYLQKPVSLAQLRSLVKTALKVETPVRAAVQQRLLGESPAIQEVLRLTDKLSRSQAAVYI
GGESGTGKEQAARLIHELGPRADKPFVAVNCGAIPESLMESEFFGCRKGAFTGADADRDGFFQQAQGGTLFLDEVAELPL
AMQVKLLRAIQEKTVRKLGASQEEAVDARIICATHRDLAVRVESGQFRQDLYYRLNVLPLRMPPLRELRDDIPLFAERLL
QRFGGASAPQLSADARRALQDYAYPGNFRELENILERAVALAAGPALSREDLQLTPCAEHAPEPGSGEPLQDYLDRVERE
AIVKALEGTRYNRTQAAKKLGVTFRSLRYRMERLGVK

Nucleotide

• Length: 1314 bp

>NTDB_id=251290 CRN81_RS00285 WP_099426218.1 73051..74364(-) (pilR) [Chromobacterium violaceum strain CV1192]
ATGACTAAGACACTGCGCGTATTGATCGTCGACGACGAACCGGACATCCGCGAACTGCTGGAACTGACCTTGCTGAAAAT
GGGCCTCGCCCCGGTATGCGCCGGCAGCGTGGCCGAGGCGCGTTCCGCGCTGGACGCGGGCGGATTCGACCTGGCGCTGA
CCGATATGCGGCTGCCTGACGGCGAGGGCTTGGAGGTGGTCAACCACATCGGCGAGTCCGGGCTGGATGTGCCCATCGCC
GTGATCACCGCCTATGGCAGCGCCGACAACGCGGTGCGGGCGATGAAGGCCGGCGCTTTCGACTACCTGCAGAAGCCGGT
CAGCCTGGCCCAGCTGCGCAGCCTGGTGAAGACGGCGCTGAAGGTGGAAACGCCGGTCCGCGCCGCCGTCCAGCAGCGGC
TGCTGGGCGAGTCGCCGGCGATACAGGAAGTGCTGCGGCTGACGGACAAGCTGTCGCGCAGCCAGGCCGCGGTGTACATC
GGCGGGGAGTCCGGCACCGGCAAGGAACAGGCGGCGCGGCTGATCCACGAACTGGGTCCGCGCGCCGACAAGCCCTTCGT
CGCCGTCAACTGCGGCGCGATCCCGGAAAGCCTGATGGAGAGCGAGTTCTTCGGCTGCCGCAAGGGCGCGTTCACCGGAG
CGGACGCCGACCGCGACGGCTTCTTCCAGCAGGCGCAGGGCGGCACCTTGTTCCTGGACGAAGTGGCCGAGCTGCCGCTG
GCGATGCAGGTCAAGCTGCTGCGCGCGATCCAGGAAAAGACCGTGCGCAAGCTGGGCGCCAGCCAGGAAGAGGCGGTCGA
TGCCCGCATCATCTGCGCTACCCATCGCGATCTGGCCGTGCGGGTGGAGTCCGGGCAGTTCCGCCAGGACCTGTACTACC
GCCTCAACGTGCTGCCGCTGAGAATGCCGCCGCTGCGCGAGCTGCGCGACGACATCCCGTTGTTCGCCGAGCGGCTGCTG
CAGCGCTTCGGCGGCGCGTCCGCGCCGCAGTTGTCCGCCGACGCCCGCCGCGCGCTGCAGGACTACGCCTACCCCGGCAA
TTTCCGCGAGCTGGAGAACATCCTGGAGCGGGCGGTGGCGCTGGCCGCCGGGCCCGCGCTGTCGCGCGAAGACCTGCAGC
TGACGCCCTGCGCCGAGCATGCGCCGGAGCCCGGCAGCGGCGAGCCGCTGCAGGACTACCTGGACCGCGTCGAGCGCGAG
GCCATCGTCAAGGCGCTGGAGGGCACCCGCTACAACCGCACCCAGGCCGCTAAGAAACTGGGGGTCACCTTCCGCTCGCT
GCGTTACCGGATGGAGCGGCTGGGCGTGAAGTGA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (7-116)

• Bacterial regulatory protein, Fis family (HTH_8) (394-433)

• Sigma-54 interaction domain (Sigma54_activat) (134-300)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	59.091	100	0.595
pilR	Acinetobacter baumannii strain A118	44.978	100	0.471
luxO	Vibrio cholerae strain A1552	39.952	95.652	0.382