Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   BS636_RS08765 Genome accession   NZ_CP024011
Coordinates   1836346..1836729 (+) Length   127 a.a.
NCBI ID   WP_004814763.1    Uniprot ID   -
Organism   Acinetobacter sp. LoGeW2-3     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 1831346..1841729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  BS636_RS08755 (BS636_08755) - 1834194..1835327 (-) 1134 WP_099338408.1 efflux RND transporter periplasmic adaptor subunit -
  BS636_RS08760 (BS636_08760) - 1835379..1836008 (-) 630 WP_228206948.1 hypothetical protein -
  BS636_RS08765 (BS636_08765) pilG 1836346..1836729 (+) 384 WP_004814763.1 twitching motility response regulator PilG Regulator
  BS636_RS08770 (BS636_08770) - 1836759..1837127 (+) 369 WP_099338410.1 response regulator -
  BS636_RS08775 (BS636_08775) - 1837133..1837669 (+) 537 WP_099338411.1 chemotaxis protein CheW -
  BS636_RS08780 (BS636_08780) - 1837715..1839787 (+) 2073 WP_099338412.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14201.30 Da        Isoelectric Point: 4.7172

>NTDB_id=251147 BS636_RS08765 WP_004814763.1 1836346..1836729(+) (pilG) [Acinetobacter sp. LoGeW2-3]
MDDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSQSYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLTAIRNHISA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=251147 BS636_RS08765 WP_004814763.1 1836346..1836729(+) (pilG) [Acinetobacter sp. LoGeW2-3]
ATGGACGATAAATTCCAAAATCTAAAAGTTATGGTCATTGATGATTCAAAAACCATTCGTCGTACAGCGGAAACTCTTCT
TCAGCGTGAAGGTTGTGAAGTCATTACTGCAGTAGATGGTTTTGAAGCATTGTCAAAAATCGCAGAAGCGAATCCCGATA
TCGTTTTTGTGGATATTATGATGCCTCGTCTTGATGGTTATCAGACTTGTGCCTTAATTAAAAACTCGCAAAGTTATCAG
AACATTCCTGTTATTATGCTATCGAGTAAAGATGGTTTGTTCGACCAGGCCAAAGGCCGTGTGGTAGGTTCAGATGAATA
TCTCACCAAGCCATTTAGCAAAGATGAGTTGCTTACCGCAATCCGCAACCATATCAGTGCTTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

95.276

100

0.953
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.593

88.976

0.37

Multiple sequence alignment