Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | BS636_RS06940 | Genome accession | NZ_CP024011 |
| Coordinates | 1459400..1459927 (+) | Length | 175 a.a. |
| NCBI ID | WP_099338124.1 | Uniprot ID | A0A2D1IP46 |
| Organism | Acinetobacter sp. LoGeW2-3 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 1454400..1464927
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BS636_RS06925 (BS636_06925) | pilM | 1456940..1457998 (+) | 1059 | WP_099338121.1 | pilus assembly protein PilM | Machinery gene |
| BS636_RS06930 (BS636_06930) | pilN | 1457998..1458639 (+) | 642 | WP_099338122.1 | PilN domain-containing protein | Machinery gene |
| BS636_RS06935 (BS636_06935) | comO | 1458633..1459400 (+) | 768 | WP_171266066.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| BS636_RS06940 (BS636_06940) | pilP | 1459400..1459927 (+) | 528 | WP_099338124.1 | pilus assembly protein PilP | Machinery gene |
| BS636_RS06945 (BS636_06945) | pilQ | 1459989..1462124 (+) | 2136 | WP_416202907.1 | type IV pilus secretin PilQ | Machinery gene |
| BS636_RS06950 (BS636_06950) | aroK | 1462161..1462697 (+) | 537 | WP_099338126.1 | shikimate kinase AroK | - |
| BS636_RS06955 (BS636_06955) | aroB | 1462725..1463804 (+) | 1080 | WP_099338127.1 | 3-dehydroquinate synthase | - |
| BS636_RS06960 (BS636_06960) | - | 1463818..1464660 (+) | 843 | WP_099338128.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19319.51 Da Isoelectric Point: 8.0098
>NTDB_id=251142 BS636_RS06940 WP_099338124.1 1459400..1459927(+) (pilP) [Acinetobacter sp. LoGeW2-3]
MKKLKITLTVLAVTVLVGCESRIDVVNQEMANIRNQPALPIEPAPDFTQVETFSYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNLSRQLQPLESYPLETLTMKGSLKNQAGQIMALINTPDGEIERVQRGSYMGLNHGRVVNITPTQIDLIEIIPDGREG
YVERPRSMVLIGPAP
MKKLKITLTVLAVTVLVGCESRIDVVNQEMANIRNQPALPIEPAPDFTQVETFSYAAHQLKSPFLPSSLAAELKIMAGKR
VYPNLSRQLQPLESYPLETLTMKGSLKNQAGQIMALINTPDGEIERVQRGSYMGLNHGRVVNITPTQIDLIEIIPDGREG
YVERPRSMVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=251142 BS636_RS06940 WP_099338124.1 1459400..1459927(+) (pilP) [Acinetobacter sp. LoGeW2-3]
ATGAAGAAATTAAAAATTACTTTAACTGTCCTGGCTGTTACAGTGCTAGTAGGCTGTGAATCACGCATTGATGTTGTAAA
TCAGGAAATGGCAAATATCCGGAATCAGCCAGCTTTACCAATTGAACCAGCTCCCGATTTTACTCAGGTTGAAACTTTTA
GTTATGCTGCGCATCAGTTAAAAAGTCCATTCTTGCCAAGCTCATTGGCAGCAGAACTGAAAATTATGGCAGGTAAGCGG
GTATATCCTAACCTGTCACGACAGCTACAGCCACTAGAAAGCTACCCGCTTGAGACTTTGACCATGAAAGGAAGTCTTAA
AAATCAGGCCGGACAGATTATGGCTTTGATTAATACACCGGATGGGGAAATTGAGCGTGTACAGCGCGGCAGTTATATGG
GACTCAATCATGGTCGAGTGGTCAATATTACACCGACACAAATTGATTTAATCGAGATTATTCCAGATGGACGTGAAGGT
TATGTGGAGCGCCCTCGCAGCATGGTCTTGATTGGGCCTGCGCCATAA
ATGAAGAAATTAAAAATTACTTTAACTGTCCTGGCTGTTACAGTGCTAGTAGGCTGTGAATCACGCATTGATGTTGTAAA
TCAGGAAATGGCAAATATCCGGAATCAGCCAGCTTTACCAATTGAACCAGCTCCCGATTTTACTCAGGTTGAAACTTTTA
GTTATGCTGCGCATCAGTTAAAAAGTCCATTCTTGCCAAGCTCATTGGCAGCAGAACTGAAAATTATGGCAGGTAAGCGG
GTATATCCTAACCTGTCACGACAGCTACAGCCACTAGAAAGCTACCCGCTTGAGACTTTGACCATGAAAGGAAGTCTTAA
AAATCAGGCCGGACAGATTATGGCTTTGATTAATACACCGGATGGGGAAATTGAGCGTGTACAGCGCGGCAGTTATATGG
GACTCAATCATGGTCGAGTGGTCAATATTACACCGACACAAATTGATTTAATCGAGATTATTCCAGATGGACGTGAAGGT
TATGTGGAGCGCCCTCGCAGCATGGTCTTGATTGGGCCTGCGCCATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
76.571 |
100 |
0.766 |
| comL | Acinetobacter baylyi ADP1 |
69.006 |
97.714 |
0.674 |