Detailed information NTG0024950

Bioinformatically predicted

Overview

• Name: recF
• Type: Machinery gene
• Locus tag: SAK_RS10650
• Genome accession: NC_007432
• Coordinates: 2104985..2106094 (+)
• Length: 369 a.a.
• NCBI ID: WP_000264870.1
• Uniprot ID: Q3JYE9
• Organism: Streptococcus agalactiae A909
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2099985..2111094

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SAK_RS10625 (SAK_2109)	-	2100357..2101196 (-)	840	WP_000181757.1	energy-coupling factor ABC transporter ATP-binding protein	-
SAK_RS10630 (SAK_2110)	pgsA	2101196..2101738 (-)	543	WP_000239224.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	-
SAK_RS10635 (SAK_2111)	yfmH	2101861..2103144 (-)	1284	WP_000217765.1	EF-P 5-aminopentanol modification-associated protein YfmH	-
SAK_RS10640 (SAK_2112)	yfmF	2103146..2104390 (-)	1245	WP_000706190.1	EF-P 5-aminopentanol modification-associated protein YfmF	-
SAK_RS10645 (SAK_2113)	yaaA	2104629..2104982 (+)	354	WP_000384867.1	S4 domain-containing protein YaaA	-
SAK_RS10650 (SAK_2114)	recF	2104985..2106094 (+)	1110	WP_000264870.1	DNA replication/repair protein RecF	Machinery gene
SAK_RS10655 (SAK_2115)	-	2106106..2106972 (-)	867	WP_000398683.1	GRP family sugar transporter	-
SAK_RS10660 (SAK_2116)	-	2107028..2107690 (-)	663	WP_001871057.1	helix-turn-helix domain-containing protein	-
SAK_RS10665 (SAK_2117)	guaB	2107765..2109246 (-)	1482	WP_000073440.1	IMP dehydrogenase	-
SAK_RS10670 (SAK_2118)	-	2109403..2109888 (-)	486	WP_001034427.1	arginine repressor	-
SAK_RS10675 (SAK_2119)	-	2109898..2110578 (-)	681	WP_000628848.1	Crp/Fnr family transcriptional regulator	-

Sequence

Protein

• Length: 369 a.a.
• Molecular weight: 42471.27 Da
• Isoelectric Point: 7.3132

>NTDB_id=24950 SAK_RS10650 WP_000264870.1 2104985..2106094(+) (recF) [Streptococcus agalactiae A909]
MWIKNISLKHYRNYEEAQVDFSPNLNIFIGRNAQGKTNFLEAIYFLALTRSHRTRSDKELVHFKHHDVQITGEVIRKSGH
LSLDIQLSEKGRITKVNHLKQAKLSDYIGAMTVVLFAPEDLQLVKGAPSLRRKFLDIDIGQIKPTYLAELSNYNHVLKQR
NTYLKTTNNVDKTFLSVLDEQLADYGSRVIEHRFDFIQALNDEADKHHYIISTELEHLSIHYKSSIEFTDKSSIREHFLN
QLSKSHSRDIFKKNTSIGPHRDDITFFINDINATFGSQGQQRSLILSLKLAEIELIKTVTNDYPILLLDDVMSELDNHRQ
LKLLEGIKENVQTFITTTSLEHLSALPDQLKIFNVSDGTISINEKKATD

Nucleotide

• Length: 1110 bp

>NTDB_id=24950 SAK_RS10650 WP_000264870.1 2104985..2106094(+) (recF) [Streptococcus agalactiae A909]
ATGTGGATAAAAAATATTTCTTTAAAACATTATCGTAATTATGAAGAAGCACAAGTAGATTTTTCACCCAACCTCAATAT
TTTCATTGGCCGCAATGCTCAAGGAAAGACAAATTTTTTAGAAGCAATCTACTTCTTGGCTTTGACTCGAAGTCATCGTA
CCCGTTCTGATAAAGAACTTGTACATTTTAAACACCATGATGTACAAATTACAGGTGAGGTAATCCGCAAAAGCGGCCAT
CTTAGCTTAGATATTCAATTATCTGAAAAAGGAAGAATCACTAAGGTTAACCATCTTAAACAGGCAAAATTATCTGATTA
TATTGGGGCTATGACTGTCGTACTTTTTGCCCCTGAAGATCTTCAATTAGTTAAAGGTGCACCTAGCCTAAGACGGAAAT
TTTTAGATATAGATATTGGACAAATTAAGCCAACGTACTTAGCTGAACTTTCAAATTACAATCATGTATTAAAACAAAGA
AACACTTATCTAAAAACTACTAATAACGTCGACAAAACTTTTTTATCAGTCCTTGATGAACAATTAGCTGATTATGGAAG
TCGTGTCATTGAACACCGTTTTGATTTTATCCAAGCCCTAAATGATGAAGCGGACAAACATCACTACATTATCAGTACTG
AGTTAGAACATTTATCTATTCACTACAAATCGTCAATAGAGTTTACAGATAAGTCAAGTATTAGGGAACATTTTTTAAAC
CAATTATCTAAAAGCCACTCAAGAGACATCTTTAAGAAAAACACAAGCATCGGACCTCATCGTGATGATATTACTTTCTT
TATTAATGATATCAATGCTACTTTTGGTAGCCAAGGGCAACAAAGAAGCCTTATTTTATCATTGAAATTAGCAGAAATTG
AGCTAATAAAAACCGTTACCAACGATTATCCGATTCTCTTACTTGACGACGTCATGAGTGAACTTGACAACCATCGTCAA
CTAAAACTCTTAGAGGGAATCAAAGAGAATGTTCAAACATTTATTACTACAACAAGTTTAGAGCATTTAAGTGCTTTACC
TGATCAACTCAAAATCTTTAATGTTAGTGATGGTACTATTAGTATTAATGAAAAAAAAGCAACAGATTAA

Domains

Predicted by InterProScan.

• RecF/RecN/SMC N terminal domain (SMC_N) (3-359)

3D structure

• AlphaFold DB: Q3JYE9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recF	Streptococcus pneumoniae R6	63.636	98.374	0.626
recF	Bacillus subtilis subsp. subtilis str. 168	44.837	99.729	0.447