Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   CP943_RS17610 Genome accession   NZ_CP023665
Coordinates   3432060..3434381 (-) Length   773 a.a.
NCBI ID   WP_023856154.1    Uniprot ID   -
Organism   Bacillus paralicheniformis strain Bac84     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3427060..3439381
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CP943_RS17570 - 3427525..3427956 (+) 432 WP_003184834.1 Na(+)/H(+) antiporter subunit B -
  CP943_RS17575 - 3427956..3428297 (+) 342 WP_020452785.1 Na(+)/H(+) antiporter subunit C -
  CP943_RS17580 - 3428290..3429768 (+) 1479 WP_026580052.1 Na+/H+ antiporter subunit D -
  CP943_RS17585 - 3429774..3430250 (+) 477 WP_020452787.1 Na+/H+ antiporter subunit E -
  CP943_RS17590 - 3430250..3430534 (+) 285 WP_003184842.1 Na(+)/H(+) antiporter subunit F1 -
  CP943_RS17595 mnhG 3430518..3430892 (+) 375 WP_023856153.1 monovalent cation/H(+) antiporter subunit G -
  CP943_RS17600 - 3430929..3431318 (-) 390 WP_009329508.1 hotdog fold thioesterase -
  CP943_RS17605 comA 3431335..3431973 (-) 639 WP_003184849.1 response regulator transcription factor Regulator
  CP943_RS17610 comP 3432060..3434381 (-) 2322 WP_023856154.1 ATP-binding protein Regulator
  CP943_RS17615 comX 3434421..3434585 (-) 165 WP_023856155.1 competence pheromone ComX -
  CP943_RS17620 - 3434600..3435469 (-) 870 WP_023856156.1 polyprenyl synthetase family protein -
  CP943_RS17625 degQ 3435656..3435796 (-) 141 WP_003184860.1 degradation enzyme regulation protein DegQ Regulator
  CP943_RS17635 - 3436408..3436629 (+) 222 WP_230368259.1 hypothetical protein -
  CP943_RS17640 - 3436672..3437892 (-) 1221 WP_020452793.1 EAL and HDOD domain-containing protein -

Sequence

Protein


Download         Length: 773 a.a.        Molecular weight: 88717.73 Da        Isoelectric Point: 5.9489

>NTDB_id=249056 CP943_RS17610 WP_023856154.1 3432060..3434381(-) (comP) [Bacillus paralicheniformis strain Bac84]
MRVNYNKLSLIIILLSLSLVPYIIYVNLHSSYLGMTMQFNEKNEYQVFEIEKGSLAQSLGFEKGDVILEINGKSVEKLRA
DDGKLADELSDVKSMIVERDGEIGFVETGYELVSYESLFLFIIPMMFYLLSLFCVYFIIKSNKRLNSASAFILIVFLLVT
STAYSCSVGSAKGDSLSIYITMITFQFVPVLYLHYIYQYFKEKGKEFFNNKIFLFLYPVGLLNLLLEIFSDNLQISYSSI
KLFNLVSFLFVTIIAFALIIYGVIKNKASEQAYFLRILVITNFVAFIPFLIFYVIPYVFIGDYIFPAMFVVPFLLIIPFS
LVYQFIATKIYDIEFLLGRFKYYGLLAILPSLTAVGVFTLTQELSNSLNTVKNTIFIYFIMLGVFYLKEILDFRFRLKRF
SEKFNYQDSVFKFTQLIRSSTSLAQVLRELSQTILDVLPVSQAYVLELKSDGTVGLLENNANDQVWKPYEKEAFRAITDI
GKIVEVDRGFLIKIGERGGTSYVMLCLSVLNTPRLTRDEISWLETLAFYTSVSLENVLKIGELMEHLEHVKKEGPNPAWL
NKLMFAIEEKQRSDLARDLHDSVLQDMISLKHQSEMFLADFEKDKVCTNQIRQRLINMNEQMSTVIQTTRETCQELRPQL
LYDLGLVKALSKLAAQHQESSSIDKIRLNTERFSKVLDLDTQLNLYRIVQELLSNAVKHSKANEVLIMLVCIKEKVVLHY
EDDGIGFDPDKLYQNSASMGLSGIRERVRALNGSLDIQTAEGKGFRVAIEMEL

Nucleotide


Download         Length: 2322 bp        

>NTDB_id=249056 CP943_RS17610 WP_023856154.1 3432060..3434381(-) (comP) [Bacillus paralicheniformis strain Bac84]
ATGCGTGTTAATTATAACAAACTATCTTTAATTATTATTTTGCTAAGCCTCTCCTTGGTTCCTTATATTATCTATGTAAA
TCTGCATTCTAGTTACCTTGGAATGACAATGCAATTTAATGAAAAAAATGAATATCAAGTATTCGAGATTGAAAAAGGGT
CACTAGCCCAATCCCTAGGTTTTGAAAAAGGGGATGTTATATTAGAGATAAATGGAAAAAGTGTAGAAAAATTAAGGGCC
GATGATGGAAAATTAGCTGATGAATTAAGTGATGTTAAATCTATGATCGTTGAAAGAGATGGAGAGATAGGGTTTGTAGA
GACCGGATATGAATTGGTAAGTTATGAAAGCCTATTTCTATTTATCATTCCAATGATGTTTTATCTCCTTTCTCTTTTTT
GTGTTTATTTCATAATAAAATCAAACAAAAGGTTAAATTCGGCTTCCGCTTTTATTTTAATTGTTTTTCTGCTTGTTACA
TCAACAGCTTATTCTTGTTCTGTGGGATCTGCAAAGGGAGATAGTTTAAGTATCTATATAACAATGATAACTTTTCAATT
CGTTCCTGTTTTGTATCTCCACTATATTTATCAATATTTCAAGGAAAAAGGAAAAGAGTTTTTCAATAATAAAATATTTC
TTTTCCTATATCCGGTGGGTTTATTGAATTTGCTATTGGAAATTTTCAGTGATAATTTGCAGATTTCTTATAGTTCCATT
AAGCTCTTTAACTTGGTATCTTTCTTGTTTGTTACCATTATAGCCTTTGCTCTTATCATTTATGGTGTAATAAAAAATAA
AGCTTCAGAGCAAGCCTATTTTTTAAGGATACTCGTTATCACAAATTTTGTTGCGTTTATTCCGTTCTTAATTTTCTATG
TCATACCATATGTATTTATCGGGGATTATATATTCCCGGCAATGTTTGTCGTTCCTTTTTTGTTGATTATTCCTTTCTCA
TTAGTGTATCAATTTATTGCTACCAAAATATATGACATTGAATTCTTATTGGGACGTTTTAAATACTACGGATTGTTAGC
CATTTTACCAAGCTTGACAGCTGTAGGTGTATTTACTTTAACACAAGAATTAAGTAATAGTTTGAATACAGTTAAAAACA
CTATATTTATCTATTTTATTATGTTAGGTGTTTTTTATCTCAAGGAAATTCTTGATTTTCGTTTCCGTTTAAAAAGGTTT
TCTGAAAAATTTAATTACCAAGATAGTGTATTTAAGTTTACACAGCTTATACGAAGCTCGACATCGTTAGCTCAAGTGCT
AAGGGAATTGTCTCAAACGATTCTTGATGTTTTACCTGTAAGTCAGGCTTATGTACTGGAGTTAAAGAGTGATGGAACCG
TAGGGTTACTTGAAAATAATGCAAACGATCAAGTGTGGAAGCCTTATGAAAAAGAAGCTTTTAGGGCTATCACCGACATC
GGCAAAATCGTCGAAGTCGACCGCGGATTTTTGATTAAGATCGGTGAACGGGGCGGGACTTCTTATGTCATGCTGTGTTT
GTCGGTTTTAAATACGCCTAGGCTGACGCGCGATGAGATTTCGTGGCTTGAGACGCTGGCGTTTTATACGAGTGTTTCCC
TGGAAAACGTCTTGAAAATCGGCGAGCTGATGGAGCATCTGGAACATGTGAAAAAAGAAGGGCCGAATCCGGCGTGGCTG
AATAAATTGATGTTTGCGATTGAAGAGAAGCAGAGATCTGATTTGGCCCGTGATCTTCATGATTCTGTGCTGCAGGACAT
GATTTCCTTGAAGCATCAAAGCGAGATGTTTCTGGCTGATTTTGAAAAAGATAAAGTCTGTACGAATCAAATCAGGCAAA
GGCTCATCAATATGAATGAGCAAATGTCCACCGTCATCCAGACGACAAGGGAAACGTGTCAGGAGCTGAGGCCGCAGCTG
TTGTACGATCTTGGACTGGTCAAAGCCCTTTCGAAACTGGCGGCACAGCATCAGGAGTCCTCATCGATCGATAAGATCCG
CCTCAATACGGAAAGGTTCTCAAAGGTGCTCGACCTGGACACGCAGCTGAATTTGTACAGAATTGTGCAGGAGCTTTTAA
GCAATGCGGTTAAACACTCGAAAGCTAATGAGGTTTTGATTATGCTTGTCTGCATAAAAGAAAAAGTTGTTCTTCATTAT
GAAGATGACGGCATCGGTTTTGATCCGGACAAGCTTTATCAAAACAGCGCAAGCATGGGGCTGTCGGGCATTCGCGAGCG
AGTCCGCGCGCTGAACGGCAGTCTGGATATACAGACAGCAGAAGGGAAAGGCTTCAGGGTCGCCATTGAAATGGAATTGT
AA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(572-641)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(684-771)

PDZ domain (PDZ)

(31-82)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

52.591

99.871

0.525

Multiple sequence alignment