Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Regulator
Locus tag   CO686_RS07990 Genome accession   NZ_CP023507
Coordinates   1633257..1633880 (-) Length   207 a.a.
NCBI ID   WP_049501270.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   fratricide immunity (predicted from homology)   
Competence regulation

Genomic Context

Location: 1628257..1638880
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS07960 (CO686_07960) - 1628315..1628509 (-) 195 WP_000415527.1 PspC domain-containing protein -
  CO686_RS07965 (CO686_07965) recA 1628639..1629790 (-) 1152 WP_001085520.1 recombinase RecA Machinery gene
  CO686_RS07970 (CO686_07970) cinA 1629845..1631101 (-) 1257 WP_000642672.1 competence/damage-inducible protein A Machinery gene
  CO686_RS07975 (CO686_07975) - 1631174..1632214 (-) 1041 WP_000592175.1 LCP family protein -
  CO686_RS07980 (CO686_07980) - 1632219..1632740 (-) 522 WP_000455513.1 GNAT family N-acetyltransferase -
  CO686_RS07985 (CO686_07985) tsaE 1632730..1633173 (-) 444 WP_000556959.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  CO686_RS07990 (CO686_07990) comM 1633257..1633880 (-) 624 WP_049501270.1 hypothetical protein Regulator
  CO686_RS07995 (CO686_07995) ndk 1634015..1634434 (-) 420 WP_049501265.1 nucleoside-diphosphate kinase -
  CO686_RS08000 (CO686_08000) rpoC 1634545..1638210 (-) 3666 WP_000228753.1 DNA-directed RNA polymerase subunit beta' -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23680.65 Da        Isoelectric Point: 9.2521

>NTDB_id=247879 CO686_RS07990 WP_049501270.1 1633257..1633880(-) (comM) [Streptococcus oralis strain FDAARGOS_367]
MVKSIRLLLLIAVIQISFSSCLLWKESFLSLKQTNAYFLILIVGISVLCAGINYFHTADQSRHSILHVQKKVSLVYCLLL
VVNLLATCLVLSESIQTTSKLQQELVDLFLPSFFFLLGVDLLIFLPFDKIFRDIENHLNKKKTVVISVLATLVFLRNPLV
ISSILLYISIGFLCARFLFPKCIQREISFYGHLIRDILFVFSIVVFF

Nucleotide


Download         Length: 624 bp        

>NTDB_id=247879 CO686_RS07990 WP_049501270.1 1633257..1633880(-) (comM) [Streptococcus oralis strain FDAARGOS_367]
ATGGTAAAATCAATTCGCCTATTGTTGTTGATTGCAGTCATCCAGATTAGTTTTAGTAGTTGTCTATTATGGAAAGAATC
CTTTTTATCTTTAAAACAGACCAATGCTTATTTTTTGATTTTGATAGTAGGAATTTCTGTTCTTTGTGCTGGGATAAATT
ATTTCCATACAGCAGACCAGTCTAGACATAGTATTTTACATGTTCAAAAGAAAGTGAGTCTGGTTTATTGCCTCCTTTTA
GTAGTCAATCTTCTGGCAACCTGTCTGGTTCTCTCAGAAAGCATCCAGACCACTAGCAAATTGCAGCAGGAATTGGTTGA
CCTCTTTTTACCCTCCTTCTTTTTCTTGCTAGGAGTAGATCTATTGATTTTCTTACCTTTTGATAAAATTTTCCGCGATA
TAGAAAATCACCTAAATAAAAAGAAAACAGTCGTCATTTCCGTTCTAGCCACGTTGGTTTTCTTGAGGAATCCTTTAGTG
ATTTCCTCGATTCTCCTTTATATCAGTATTGGTTTTCTATGCGCACGTTTCCTTTTTCCCAAATGTATCCAAAGGGAAAT
CTCCTTTTATGGACACCTGATTCGGGATATCCTGTTTGTTTTTTCAATAGTTGTATTCTTTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Streptococcus pneumoniae D39

51.942

99.517

0.517
  comM Streptococcus pneumoniae R6

51.942

99.517

0.517
  comM Streptococcus pneumoniae TIGR4

51.942

99.517

0.517
  comM Streptococcus mitis NCTC 12261

41.117

95.169

0.391
  comM Streptococcus mitis SK321

41.117

95.169

0.391

Multiple sequence alignment