Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   CO686_RS04265 Genome accession   NZ_CP023507
Coordinates   850276..851085 (+) Length   269 a.a.
NCBI ID   WP_049518757.1    Uniprot ID   -
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 845276..856085
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS04245 (CO686_04245) pta 845932..846906 (+) 975 WP_049549926.1 phosphate acetyltransferase -
  CO686_RS04250 (CO686_04250) mutY 846989..848167 (+) 1179 WP_096753551.1 A/G-specific adenine glycosylase -
  CO686_RS04255 (CO686_04255) micA 848225..848932 (+) 708 WP_000722058.1 response regulator YycF Regulator
  CO686_RS04260 (CO686_04260) micB 848925..850274 (+) 1350 WP_096753552.1 cell wall metabolism sensor histidine kinase VicK Regulator
  CO686_RS04265 (CO686_04265) vicX 850276..851085 (+) 810 WP_049518757.1 MBL fold metallo-hydrolase Regulator
  CO686_RS04270 (CO686_04270) - 851120..851467 (-) 348 WP_049518755.1 thiol reductase thioredoxin -
  CO686_RS04275 (CO686_04275) - 851579..853297 (-) 1719 WP_000222125.1 phospho-sugar mutase -
  CO686_RS04280 (CO686_04280) - 853708..854862 (+) 1155 WP_000722099.1 DUF4352 domain-containing protein -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29920.91 Da        Isoelectric Point: 6.1738

>NTDB_id=247856 CO686_RS04265 WP_049518757.1 850276..851085(+) (vicX) [Streptococcus oralis strain FDAARGOS_367]
MSEIGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLAEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=247856 CO686_RS04265 WP_049518757.1 850276..851085(+) (vicX) [Streptococcus oralis strain FDAARGOS_367]
ATGAGTGAAATAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCTTTTTATCTGGAAACGCCAAAAAA
GAAAATCCTAGTGGATGCAGGCTTGTCTGGTAAGAAAATTACAAGTCTGCTAGCTGAAATCAATCGCAAACCTGAAGATC
TGGATGCGATTTTGATTACGCATGAGCATTCAGACCATATCCATGGGGTCGGTGTCTTGGCTCGTAAATATGGCATGGAT
CTTTACGCCAATGAAAAGACCTGGCAGGCTATGGAAAATAGTAAGTATCTTGGCAAGGTTGATTCCTCGCAAAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGGGTTAGCCATGATGCGGCAGCACCAC
AGTTTTACCGCTTTATGAAGGATGACAAGAGTTTTGTCATGTTGACCGATACAGGTTATGTAAGTGACCGTATGGCTGGA
ATAGTCGAAAATGCTGACGGTTACCTCATCGAGTCCAACCACGATGTAGAGATTTTGCGAGCAGGATCTTACGCTTGGCG
TCTCAAACAGCGAATTCTATCGGATCTCGGTCATCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTACAATGGGAA
ATCGGACTAAGAAAATCTATCTTGGGCATTTATCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAC
CAGCTAGCCCAAGCGGATCTGGGAGTCGGAGTAGACTTTAAAGTTTATGATACCTCACCAGATACTGCAACACCATTGAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

78.067

100

0.781

Multiple sequence alignment