Detailed information    

insolico Bioinformatically predicted

Overview


Name   ccpA   Type   Regulator
Locus tag   CO686_RS00335 Genome accession   NZ_CP023507
Coordinates   58278..59288 (+) Length   336 a.a.
NCBI ID   WP_001090635.1    Uniprot ID   I0Q241
Organism   Streptococcus oralis strain FDAARGOS_367     
Function   regulate comCDE transcription and transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 53278..64288
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CO686_RS00310 (CO686_00310) - 53510..54832 (+) 1323 WP_065371417.1 folylpolyglutamate synthase/dihydrofolate synthase family protein -
  CO686_RS00315 (CO686_00315) folE 54813..55367 (+) 555 WP_000380933.1 GTP cyclohydrolase I FolE -
  CO686_RS00320 (CO686_00320) folK 55608..56429 (+) 822 WP_049500585.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  CO686_RS00325 (CO686_00325) - 56422..57705 (+) 1284 WP_049500583.1 hypothetical protein -
  CO686_RS00330 (CO686_00330) - 57756..58073 (-) 318 WP_000886047.1 DUF960 domain-containing protein -
  CO686_RS00335 (CO686_00335) ccpA 58278..59288 (+) 1011 WP_001090635.1 catabolite control protein A Regulator
  CO686_RS00340 (CO686_00340) - 59341..60303 (-) 963 WP_049500580.1 asparaginase -
  CO686_RS00345 (CO686_00345) - 60369..61760 (+) 1392 WP_000453123.1 Cof-type HAD-IIB family hydrolase -
  CO686_RS00350 (CO686_00350) - 62267..64276 (+) 2010 WP_000731511.1 hypothetical protein -

Sequence


Protein


Download         Length: 336 a.a.        Molecular weight: 37214.23 Da        Isoelectric Point: 5.5033

>NTDB_id=247835 CO686_RS00335 WP_001090635.1 58278..59288(+) (ccpA) [Streptococcus oralis strain FDAARGOS_367]
MNTDDTVTIYDVAREAGVSMATVSRVVNGNKNVKENTRKKVLEVIDRLDYRPNAVARGLASKKTTTVGVVIPNITNGYFS
TLAKGIDDIAEMYKYNIVLANSDEDDEKEVSVVNTLFSKQVDGIIFMGYHLTEKIRSEFSRSRTPVVLAGTVDVEHQLPS
VNIDYKQATIDAVSYLLKENEKIAFVSGPLVDDINGKVRLIGYKEALKKAGHSYSEGLVFESKYSYDDGYALAERLISSQ
ATAAVVTGDELAAGVLNGLADHGVSVPEEFEIITTDDSQIARFTRPNLTTIAQPLYDLGAISMRMLTKIMHKEELEEREV
LLPHGLTERRSTRKRK

Nucleotide


Download         Length: 1011 bp        

>NTDB_id=247835 CO686_RS00335 WP_001090635.1 58278..59288(+) (ccpA) [Streptococcus oralis strain FDAARGOS_367]
ATGAACACAGATGATACAGTAACGATTTATGACGTCGCCCGTGAAGCAGGAGTTTCGATGGCAACAGTTAGCCGTGTCGT
TAATGGCAACAAGAATGTTAAAGAGAACACTCGAAAAAAAGTCCTAGAAGTGATTGATCGCTTGGACTATCGTCCAAATG
CGGTAGCACGTGGTTTGGCTAGCAAGAAAACAACGACAGTCGGAGTTGTGATTCCTAACATTACCAATGGTTATTTCTCA
ACGCTTGCTAAGGGAATTGACGACATTGCTGAAATGTACAAGTATAACATTGTCCTTGCAAATAGTGATGAGGATGATGA
AAAGGAAGTTTCAGTAGTCAACACTCTCTTTTCAAAACAAGTCGATGGGATTATCTTTATGGGCTATCACTTGACTGAAA
AGATTCGTTCAGAGTTTTCTCGTTCACGGACACCGGTTGTTCTTGCTGGTACTGTGGATGTAGAACACCAACTTCCAAGT
GTAAATATCGACTACAAACAAGCAACGATTGATGCTGTAAGCTACCTTCTAAAAGAAAACGAAAAGATTGCTTTTGTGAG
TGGACCACTCGTCGATGATATCAATGGCAAGGTTCGTTTGATTGGTTACAAGGAAGCCTTGAAAAAAGCAGGACATTCTT
ATAGCGAGGGATTGGTCTTTGAATCAAAATACAGCTATGACGATGGTTATGCCTTGGCAGAACGCTTGATTTCATCACAA
GCTACAGCCGCAGTTGTAACAGGTGATGAATTGGCAGCAGGTGTGTTGAATGGTTTGGCTGACCATGGCGTATCTGTGCC
GGAAGAGTTTGAAATCATTACGACAGATGACTCTCAGATTGCACGATTCACTCGTCCAAACTTGACGACTATTGCCCAAC
CTCTTTATGACCTAGGTGCTATCAGCATGCGTATGTTGACTAAGATTATGCATAAGGAAGAGTTGGAAGAACGTGAAGTT
CTCCTACCTCATGGTTTGACAGAACGCCGCTCTACACGAAAACGTAAATAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0Q241

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ccpA Streptococcus pneumoniae D39

94.345

100

0.943

  ccpA Streptococcus gordonii str. Challis substr. CH1

88.623

99.405

0.881

  ccpA Lactococcus lactis subsp. lactis strain DGCC12653

57.704

98.512

0.568


Multiple sequence alignment